Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43326 |
Symbol | |
ID | 7197388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 131040 |
End bp | 132146 |
Gene Length | 1107 bp |
Protein Length | 349 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177867 |
Protein GI | 219112231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.806781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGAAA CGTCGAGCCA TCCATTTATT GAAGTGCGAG GGCATCCGTG TCCAGCAAAT GGCTCGAGCC GTTTGTTTGT CGAGGTTTAC ACAGCCGATG TAGAGGCAAA AGAGTGTGGT ACCCTCGTCA AGCGGCTCTC CCGTGAGCTT CACTTATTGC AGCCATCGAT TGATCTTTCT CACCTGAAAC GGGTCCACCG CGTAGTCGAC ATTGTTTCAT TGAAAGCTAT CCAAGACAGC AAACGCCGAA AGACGACACA GGCAATTCAG TTAAAAATCC TATTGGGCGC TGTTAGCGTA ATTCACCAAA AGTTTTCGGT ATCGCCGCAT GGGGATAGTA TAGCAGAAAA GTTGGAGCAA ACATACAATG TGGCAAATGT GTGCACTCTA GAAGTTGGCG GAAGAGTACC AGAATCGGAA GATGAGTGGA AATTATTCAA CGAGCACTGG CCAACCTCAT TCTTTCCCCA CAAAACAACT GCTCATCTCG AGAAGGAGCT TGAGCTTTCG GAGAGGTCTC TCCAACAGAT GTGTCTAGGA ATGAGACATG CTTTGACCGA CGTGACGGCC CACGGCACCA TTAAAATACC CGGTGCCATA GTTGTTTTTC CAGATACAGG GGAAGTCCTG GCTACGTCGA CCGCAGAACG TAAGTATCAG GAGTCTGCTG AGCGGAACCC CAATCCTCTT GCTACACCTA TTCTATACGC TATACAAAAC GTCAGCCGTA AAGAACGACA ATCTGCAATT TCAAAAGGAA TGGACTGCCC TATGTTCCAA CGAGGTCAAT ATCTGTGCAC TGGCTTGGAT GTGTACACGA CCCTCGAACC AACCGTGTTT GAAGCCATGG CACTCGTGCA TGCTCGTGTG AGATACGTCG TTTTCGGATG CTCGTCCGGT ACAACGCAAC TTGGAGGATT GTCCGAAGTC AAGGTGCACG ATCTGCCCGG TACTAACCAT AGATATCGAG CCTTTTACTG CTCACCAGAA ACTGACCTTG GTCGACAGTG TCGAATGCTA GCCCCAACAG AAACAAGCCC AATGAAATAA AGAAGTAGAA ACAGTAAATT GCTAACCTGT AGTCTTCATG TTAATGTCGA TGCCGTG
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Protein sequence | MSETSSHPFI EVRGHPCPAN GSSRLFVEVY TADVEAKECG TLVKRLSREL HLLQPSIDLS HLKRVHRVVD IVSLKAIQDS KRRKTTQAIQ LKILLGAVSV IHQKFSVSPH GDSIAEKLEQ TYNVANVCTL EVGGRVPESE DEWKLFNEHW PTSFFPHKTT AHLEKELELS ERSLQQMCLG MRHALTDVTA HGTIKIPGAI VVFPDTGEVL ATSTAERKYQ ESAERNPNPL ATPILYAIQN VSRKERQSAI SKGMDCPMFQ RGQYLCTGLD VYTTLEPTVF EAMALVHARV RYVVFGCSSG TTQLGGLSEV KVHDLPGTNH RYRAFYCSPE TDLGRQCRML APTETSPMK
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