Gene PHATRDRAFT_43326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43326 
Symbol 
ID7197388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp131040 
End bp132146 
Gene Length1107 bp 
Protein Length349 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177867 
Protein GI219112231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.806781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAA CGTCGAGCCA TCCATTTATT GAAGTGCGAG GGCATCCGTG TCCAGCAAAT 
GGCTCGAGCC GTTTGTTTGT CGAGGTTTAC ACAGCCGATG TAGAGGCAAA AGAGTGTGGT
ACCCTCGTCA AGCGGCTCTC CCGTGAGCTT CACTTATTGC AGCCATCGAT TGATCTTTCT
CACCTGAAAC GGGTCCACCG CGTAGTCGAC ATTGTTTCAT TGAAAGCTAT CCAAGACAGC
AAACGCCGAA AGACGACACA GGCAATTCAG TTAAAAATCC TATTGGGCGC TGTTAGCGTA
ATTCACCAAA AGTTTTCGGT ATCGCCGCAT GGGGATAGTA TAGCAGAAAA GTTGGAGCAA
ACATACAATG TGGCAAATGT GTGCACTCTA GAAGTTGGCG GAAGAGTACC AGAATCGGAA
GATGAGTGGA AATTATTCAA CGAGCACTGG CCAACCTCAT TCTTTCCCCA CAAAACAACT
GCTCATCTCG AGAAGGAGCT TGAGCTTTCG GAGAGGTCTC TCCAACAGAT GTGTCTAGGA
ATGAGACATG CTTTGACCGA CGTGACGGCC CACGGCACCA TTAAAATACC CGGTGCCATA
GTTGTTTTTC CAGATACAGG GGAAGTCCTG GCTACGTCGA CCGCAGAACG TAAGTATCAG
GAGTCTGCTG AGCGGAACCC CAATCCTCTT GCTACACCTA TTCTATACGC TATACAAAAC
GTCAGCCGTA AAGAACGACA ATCTGCAATT TCAAAAGGAA TGGACTGCCC TATGTTCCAA
CGAGGTCAAT ATCTGTGCAC TGGCTTGGAT GTGTACACGA CCCTCGAACC AACCGTGTTT
GAAGCCATGG CACTCGTGCA TGCTCGTGTG AGATACGTCG TTTTCGGATG CTCGTCCGGT
ACAACGCAAC TTGGAGGATT GTCCGAAGTC AAGGTGCACG ATCTGCCCGG TACTAACCAT
AGATATCGAG CCTTTTACTG CTCACCAGAA ACTGACCTTG GTCGACAGTG TCGAATGCTA
GCCCCAACAG AAACAAGCCC AATGAAATAA AGAAGTAGAA ACAGTAAATT GCTAACCTGT
AGTCTTCATG TTAATGTCGA TGCCGTG
 
Protein sequence
MSETSSHPFI EVRGHPCPAN GSSRLFVEVY TADVEAKECG TLVKRLSREL HLLQPSIDLS 
HLKRVHRVVD IVSLKAIQDS KRRKTTQAIQ LKILLGAVSV IHQKFSVSPH GDSIAEKLEQ
TYNVANVCTL EVGGRVPESE DEWKLFNEHW PTSFFPHKTT AHLEKELELS ERSLQQMCLG
MRHALTDVTA HGTIKIPGAI VVFPDTGEVL ATSTAERKYQ ESAERNPNPL ATPILYAIQN
VSRKERQSAI SKGMDCPMFQ RGQYLCTGLD VYTTLEPTVF EAMALVHARV RYVVFGCSSG
TTQLGGLSEV KVHDLPGTNH RYRAFYCSPE TDLGRQCRML APTETSPMK