Gene PHATRDRAFT_43325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43325 
Symbol 
ID7197387 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp129981 
End bp131081 
Gene Length1101 bp 
Protein Length244 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177567 
Protein GI219111631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0884469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAACCTACT TCAGCCATTC ACTCGTTAAC AAACAACGTA TTACCAACAA GCGATTTGGT 
AATTCACAAA TCCTTTTTGC AAGTGCAATT TTCCGGTTTC TTGAAGATTC TGGGCGACCT
GGCACTATGT CTGGATGTCA AGGATGTTGG TAAGAAGGGA GACGCATTGG CGCACTATCA
TGGAGAATGT AAACGGGTAG ACTTGCTTGA ATTTTCTCGA ATGTCCTTAA CCTTTATACT
TTTGGTCCTG CAGTATTTTC CCTCACGGCA GGCTTTCAAT CTACGCCATG ATCCTCGCCG
TGAGTTCCTA TCTGTTCGTG ATAAGCGCCT CCTGGGGGTG CTACTATGTT GAAGTTGGCG
CAACTTTTTC TGAGAATATT CCAGGTTTGA CGGTGGACTT TAAATCGGGT ATTGGTCTGT
TTTCCTATGA AGATGTGCTT GACTTCAATA ACAACAATAA TCAATTGACG TGCTACTACT
ACACAGGCTC ACAGATTGAT GCGATGGATG GAGCTTTCAA AGCAGCGCGT GTGTTCGGTG
TTCTTGCGAA CATTTTTATT GGTGTCAGTA TGCTGGCGCT AGTAGCTGTA TCGTGCATGG
AGTACCCGCA AGTGATTTTA AAAGTCGTCG GAGGGATGCT TTTGGCAGGG TCTTTGTTCG
AATTGCTGAC ACTTACCTTT TTTGCATCCG ATGTCTGCAA CTATGACTGC GATTTTTACA
TCGGCGCCGG GATGGCAATT GGTGGAACCA TAGTCTGTTT TATGACAGCA ATTGTTGTCT
TGCAGATTCC GCCGGCAATG GAGTCATCTC TGGACCTCCA AAGTTATACG GAACAAGCTG
TGGCCTACGC CCCTGGGACC GAGACAATCA CGGAAACGGC TCTACCAGAT GGAACAAAAA
AAATCATTAA GACACACGTG CATGGGGATG GATCGAAGAC GATCGAGGAA ACTTTAGTGG
CTTGAAGTAG AGAAGAAAGA GCCACTGTTG CAATTTGGAG AGGAAAAAAT ACTTTTACAA
CCGCTTTGCA GGAAAGACAC TGCTTTGCTG AATAGTTTTC ACGGCATCGA CATTAACATG
AAGACTACAG GTTAGCAATT T
 
Protein sequence
MSGCQGCCIF PHGRLSIYAM ILAVSSYLFV ISASWGCYYV EVGATFSENI PGLTVDFKSG 
IGLFSYEDVL DFNNNNNQLT CYYYTGSQID AMDGAFKAAR VFGVLANIFI GVSMLALVAV
SCMEYPQVIL KVVGGMLLAG SLFELLTLTF FASDVCNYDC DFYIGAGMAI GGTIVCFMTA
IVVLQIPPAM ESSLDLQSYT EQAVAYAPGT ETITETALPD GTKKIIKTHV HGDGSKTIEE
TLVA