Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43320 |
Symbol | |
ID | 7197381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 107967 |
End bp | 109109 |
Gene Length | 1143 bp |
Protein Length | 368 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177865 |
Protein GI | 219112227 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.463545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCTGT CTACGTTGGG CTCCGTTTCG CCCCTCGTAT CGCCGTCGTC AGCTGCCGCA GCAGTAAGCT CTTCGCCAGT CGGGACCTTT CTGCAATCCT TGTCGACCAA TACACAAGTA GTTGGTACCG CATGGCTTGT CTCCAGCGCA CTCTTTACAA CCTACTCGAC AACGGCCTTC TTGCAGTACA AACCACCACT CGTTGCGGTA ACACCGACTC GGCGCAAAGA CCAAATGTTG GTGCACCCCG ATGATCAACG GAGCAATTTC TTCTCCCTTT CCCGACCCAC TTTGCTAACC CTCTATCGCT TTGGAGGATC CCTATTGCTG GGTTTGCTGT TGCACCCGGA TTTCCAGATC CGACAACGTC TTCATGAAAC CCTCCAAGCC GTACCAACCT TTGGTCTTTC GGCCTTGTTT CTTTTTGTGG CCAACTTTAG CAATTCAATA AGCTTGAGCC GTATCGGAAT CTCCCTCACC TATACTTCCA AATGCGCCAT CCCCATCATT ACCGCGCTAC TCACCGTCTT GCTGGACGGG CCGACGGCGT TGCCCAACAC GCTGGCCCTC CTTTCGCTGT TGCCCATTGC GGCTGGAATT GCGGCCGCCT CTTGGAATGC ACCAACCTTT GAAAGGATGG GCTTTGCGGC GGCTCTGGTC TCGGCGGCGT CGCAATCCGC CCTGAACGTG ACGAGCAAGC GAGCCATGAT GCGGTCCAAT CTGACCGGGC CCTCTGCGCA ACGAGTCATG GTAGCCGTTG GTTTGTGCAT TACATTAGTA GTAGTGGCCA TGCAGAACTA CACCAACCAA AGTACGAAGC ACAACGATTC CTTGGTTGTG GAAGAGCAGC TAAAGCGGCA GATTCCTCCG GTGTGGCTGA GTTGTGCAGC CTTTACGGCG TATCACGCTG AGTATGTACT GTCGTTTATG TTTGTCAAAC TCGTGGCCCC CATCACGTAC GGAACATGTG ATGCGATACG ACGGTTGTCG GTGATTCTAT CCGGACGAGT CTTCTTTGGA GGAGCCAAAC TCACCAAGCT GAATATTGCC GGCATTGCCT TGGCTCTCCT TGGTGCATTG AGCTATTCCG TAACTACGTC ACTGTGAACA GTATACATAA ACAATGGTGC AAAATGCACA AAA
|
Protein sequence | MSLSTLGSVS PLVSPSSAAA AVSSSPVGTF LQSLSTNTQV VGTAWLVSSA LFTTYSTTAF LQYKPPLVAV TPTRRKDQML VHPDDQRSNF FSLSRPTLLT LYRFGGSLLL GLLLHPDFQI RQRLHETLQA VPTFGLSALF LFVANFSNSI SLSRIGISLT YTSKCAIPII TALLTVLLDG PTALPNTLAL LSLLPIAAGI AAASWNAPTF ERMGFAAALV SAASQSALNV TSKRAMMRSN LTGPSAQRVM VAVGLCITLV VVAMQNYTNQ STKHNDSLVV EEQLKRQIPP VWLSCAAFTA YHAEYVLSFM FVKLVAPITY GTCDAIRRLS VILSGRVFFG GAKLTKLNIA GIALALLGAL SYSVTTSL
|
| |