Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43298 |
Symbol | |
ID | 7197072 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 51905 |
End bp | 53083 |
Gene Length | 1179 bp |
Protein Length | 298 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177855 |
Protein GI | 219112207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTTTTTGG TCTCAGATCA ATATGACGCC TCCGCACGAA GAAGATTCGT CTACTTTGTC AGGTGGACAC TCGACATCCC CTCGCAATTC CTTACAAGCA GACGGCAATG CCCCTCAGTA TCTCTACATT GTCCGCCACG GCGACCGATG GGACTATGAG AATCCAACGG TAAGAAAGGA TCGATTTATA AAAGCAAAAG CATGTCTTGT TTGGCGGAGA ACCAAACAAA AACCTGACAT CGAGATTCGC GTTTCTATCG ACTGACACAA CCCTCTCGTC GCGACGACAG TGGGTCGAAA CCACGGATCG CTCGGGTGAT CCTCCGCTGA GCAAACTCGG TCATCAACAA GCGCGGGAAA CGGGCATCTT TCTGGATCAA CTCTTGTCGA GTGATGGAAT CACTGGAGAC GATTTAACTT GGATGAGTTC TCCCTTTTTG CGCACCCTAC AAACCTCAGA CAACGCCCTC AACGCCATGA CCAAGACCAA CATCAAGAAC GTACCTATTC TTCCCGAATA CTCTGTCTTT GAGTGGGACG GAAAAGGAGG CAAATGGCAC GAGTCGCTGC CGCCCTTGTC GGAACGGGTA CACTACTTCC CTCGCATGGA CGTCAAGTAC CAGAGTCTGT TCGTGCCGAC TTTGCCGGAG CCGCGATCGG AGTTTCACGG ACGGTGCGAA CGTGCAATCC ATGCTCTGAA TCAACGCTAT TGTTTTAAGC CACGCAGCGC GCTGGTAGTC GTCTCGCACG CGGCAGCCTG TATAGGTTTG GCGCGAGCGG CGGCGAACCT CACCCTGACC GATATCACAC CTGCAGCACC GTGTACTATC TTTCGTTTAA GCCGTACCGA CAATTCCGCG ACCTGGCAAA TGGATCAGCA TGATGCTGTA AATAGTTTGA ACGGACACAC GTCCCATTTG AGCGATTTAG GAAGCACTAC AGTGCCGTGG AACCACTTTG GTGACAAAGC AATCCATAGG GGTTATACCG GACCACCAAC GTCTCGGTTT GCCCCCAAAG ATCTAAACGA CGAATTGTAA CTACATGTGA TCCTTCCTCG ACCCGTTGGT ACGGTGGATT CTTTCCATGT CTTGGACTTG GAAGCTCCGT TGCCTATGGC TATAGGAAAT GGATCTGGTC GGTCATGTTC GCTGTAGTAA GGCAGATCTT TATTCCTCT
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Protein sequence | MTPPHEEDSS TLSGGHSTSP RNSLQADGNA PQYLYIVRHG DRWDYENPTW VETTDRSGDP PLSKLGHQQA RETGIFLDQL LSSDGITGDD LTWMSSPFLR TLQTSDNALN AMTKTNIKNV PILPEYSVFE WDGKGGKWHE SLPPLSERVH YFPRMDVKYQ SLFVPTLPEP RSEFHGRCER AIHALNQRYC FKPRSALVVV SHAAACIGLA RAAANLTLTD ITPAAPCTIF RLSRTDNSAT WQMDQHDAVN SLNGHTSHLS DLGSTTVPWN HFGDKAIHRG YTGPPTSRFA PKDLNDEL
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