Gene PHATRDRAFT_43268 details

Gene Information

• Locus tag: PHATRDRAFT_43268
• ID: 7196977
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2485975
• End bp: 2489447
• Gene Length: 3473 bp
• Protein Length: 1050 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177530
• Protein GI: 219111557

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGCAGCGTC ACCCGAAAAA GCTCAAAAGC AACCCAACAG TAACCATGAT CGAGAGTACT 
ACTAGACACA GCGCCAACGG TAGCGAAGGG GACTCGAACG AGGTGGTAAG CCACAGCACG 
AGAACCCCAC TTTCCTCACA GCTGTCTTTG GGTCCCGAAC GCATTCCCCC AACTTCAGCA 
AGAAAGAGTG GTGACGAACT AGTGAAGTAT TTTGCTCTTC CTTGGCGGAC ATTGCTTCGG 
AAGCTTGCGC GTGTCGGCAC GAAGCAACTG TCCGCAGCCG TAGCAGCCAC GGGAAGGGCG 
TACTACAACG TGGGAACAGT GAAGAAATCG GGGATTGGTC ATCGCGATGT AGCACCAATG 
GCAGCGGGGC TGCGGTAGTT ACCGAAAAGA CCTCCTCGGG AGATGACGTC GAGTCACGTG 
CCAACACTTC GAATGTCGCG TCTTTATTGG GAGATAGACG ATCCCTACCA ATGTCTGTAG 
GCCATGACAA TGGTGAAGTG TTTTGCGAAC CCTCGGGAGC AGCTCAGCAA TTTCATCACT 
ACCCGCATCG CCAGCGAAGA CACTCTGAGA GAGAGGGAGC TGGAACTACA GGAGAATTAC 
CCCTGGGCGG GGATCCACTT CAGGATTGCA ATTCACACTT ACACGCAGCC AATCGCCGTC 
GAGTCACCGC ATCATCACCG CTTTCCAAAC ATTGTCCTTC TCCAAAGGCA TCGTTCGAGG 
CAATGCTGGC AACCACCACC AGCTCGATTC GCTCAGGAAA AAATGGGGCG GCAAAGAAGA 
ACACAGGATT ATCGAAGGGA CGAAAGAACA CGAAAGGTGT ATTGGCACAT CATATGGCTG 
GGACGTATCC GATGCAGAGA ACAACTCATC GATTTGCCCA ACTACAACAA AAACGCACCG 
ACTCGGATGG GATGACCTCG AATGAACCTC GAGATGCTTT TAAAAAAGCA TGGATGAAAA 
TGGATAGTGC TTCCTTCTCA AATGGAAGCC CTTCATCTCC CAGTAGCCGG ACTTCCGACG 
ACGACATAGA AGGCTGGAAC GGGAGCTACT CTGGAAGTGG CACAGAAGGG GGTTATGCGG 
CTTCGGCGTC GTCTAACGAA ACTCTTTCAG GAGCTGAAAG ATCATGCTCG TCTGATTTAT 
CTGCAGAAGC TTTAAAGTTA AGACACATCA ACACTTCCTG CAATCCGGAC GCTTCTGAGC 
ATGGCAGGAA GCAAGAGTCG ACGTTTTCAA CATCTTCCGA CATTGCCGAT TTCAGCTCAG 
GTGGCTCCGA GTTTGAATCC GTTGACGAAA GCATACCTGA CGCGGTATCG GATTCCGCTT 
CGAACGCATT GTCTTCGAAC GGTAGCCGCT TCTTCGACAA AAGAGAGGAT GAATTCAAGG 
CCACCAAACG AAACCATCCA AGACGTCAAG CTTCCATACC TCGCAATCAC TTGAGCTTGT 
CGCAACTTGC AATGCAGAAT AGTAATAAAG TTTCGAATCA GACCAACCTG ACTGTGAAAC 
CAAGCGCTTG TCACGAAATT AATGGAAAGG CCCCTATTTT AGCCTTGGGA GGAGATGTTA 
TGGCGCACGT CTTGGCATTT TTGGAGCCAC CAAAGATCCT GGAGGTTATT ACGGCTCCAC 
TCTCGAAAGA TTGGCTGAAC GCCTTCTCCC ATCAGTCAGA GCTTTGGCGT GTGCTCTGTC 
TTCAGGAGCC TTTGAAGGCT AGAATCGAGA ACGAACCGGA CAGCGACGAC GAATCTTTTA 
CAGGTTCTTT CTCTTCTATC ACCGGATCCC AACACCGCCT CACATTTGGC AAGTTTAGAC 
TCTTATACAC GGCATTTGTC CGTTGTATGA AATATTTGGC TCGCATTAAG GACGACGCAT 
CAAATGGAAG ACCTCTATCG GTGGTAGATT ACGGTGTTGC CGACGGCATG GGAAGCCACG 
ACATTGGTTC CAATCAGAAT CTTCGACAGT TTCTGGCAAG AAGTAGAGGT GTAAGTTTCC 
TCACTGGACA GAATGAACAG GCCGATACGC CCCACAGCGG CAGCCGTCAT CACGCATTTG 
CTACTATAAC TCAGTCGATT GGAGTCTCGG ATAACGGCAG TGCGACTAAA TCCAAACGGA 
AGCATAAGGA GGAGGAGGAA TGTATGGCTG TCAAGAAGAT GCGACGCTTC GCCAGTGGGC 
CCTCGGCGCT TACGCAGAGA TTGCTCGGAC CACCCAGCAC CGGAACTCCA GGTAACACCG 
AGTTGCCATG GTCCTGTGCG ATCTTTTCGA TCGTTAATTG GATGCTTGCT TTCTCGGATG 
TGGAGGGTAT TCAGACGATG TGCCTGAGAG ATTTGCCGTC TTTGCTCGAA GATGAACAAC 
AGCGAATCAC TGCCCAGCGA GCAGGACTGA CGGACGTGGT ACTCCGCGCT ATGGTTACGT 
TTCCCGACAG TAGCCCACTG CACACGGCAG CGTTTCACAC CATTGTCCTT CTGGCCCGTC 
CATTGGGTGG TCGAGAGGGC ATGTTGTTCC ATACGTCAAT GGTGAATTCA TCGGGCATCT 
TCAGTGCTAG CAGTGTGGCC TCTCGCAATG GTAAGAGCGG TATAGCTGTT ATGCTTGATT 
CAATGAAAAG GTTTCAGCAA GACGAAGTAC TTCAAGCCAT GAGTTGTTGG TCCCTTGTAA 
ATATTGCTCT AGCCCCGGCA CAGAAGGAAG TTCTTGTGAA TCTTGGTGGT ATCGAAGTGA 
CATCCAGGGC TATGTGTGCT CATCCGCATA GCGCTGAAGT TCAATTCCGT GCGCTTTTTG 
CTCTGATCAA TCTTGTAATC CCCTCGCGAG ACCAAGGAGA GCCTTTAAGA GGAGAAGTGA 
TTACCGAAAA GGAAATGCTC GATGAAAGTG TTGATCAGAT CATCCACCTC GTTCTCCTGG 
CGATGAAGAA CTTTTGCGCA TCTGAAGCAA TCGTGAATAG AGCGTGCCTT GTTCTTCACA 
ATGTGTCACT TACTCGAGAG TACCACGAAA CACTCCTTTG TTGTCCAAAC TGTTACCAGA 
TGCTGGAATG GTGCTTGGCC AACTACCCAA CTGATCAGGT CCTGCAGCAA AGCGCTTCGG 
GAACCTTACA CCGCCTCCAG CTCACTTTGA ACAGTGACGA AATCCTTCGA ACTCGATTTG 
CTACTACTTT ACAAGCGCAG CAGCAAATGT CCCTCGAGAA TGTGCATAGA GAGGCGATTG 
TCGCTCATGA GCAGCACGCT CAAAGTCGGA CGATATAACT GTAAAATACA CCGCCGGAGC 
ACATGTACTG AAATGTTGTT GACAGTGAGT GACTTTTGAT TATATTAAAT TTGACCATAA 
GGACGTGATC AACTATTTGA CTGAATCGAC ATGATATTGC TACAACTGTT TGTTAATATA 
CGCACAAACA ACGTAGCATC AATGGACAAT TGGTCTTCGC GCTTTCTGGT ATTAATAGTG 
AGGAAAATAG GCGCTATACA TTAGACTAAA CGGTGTAATT TCACGCGATG CCG 

 

Protein sequence

MIESTTRHSA NGSEGDSNEV VSHSTRTPLS SQLSLGPERI PPTSARKSGD ELVKYFALPW 
RTLLRKLARV GTKQLSAAVA ATGRAEEIGD WSSRCSTNGS GAAVVTEKTS SGDDVESRAN 
TSNVASLLGD RRSLPMSVGH DNGEVFCEPS GAAQQFHHYP HRQRRHSERE GAGTTGELPL 
GGDPLQDCNS HLHAANRRRV TASSPLSKHC PSPKASFEAM LATTTSSIRS GKNGAAKKNT 
GLSKGRKNTK GVLAHHMAGT YPMQRTTHRF AQLQQKRTDS DGMTSNEPRD AFKKAWMKMD 
SASFSNGSPS SPSSRTSDDD IEGWNGSYSG SGTEGGYAAS ASSNETLSGA ERSCSSDLSA 
EALKLRHINT SCNPDASEHG RKQESTFSTS SDIADFSSGG SEFESVDESI PDAVSDSASN 
ALSSNGSRFF DKREDEFKAT KRNHPRRQAS IPRNHLSLSQ LAMQNSNKVS NQTNLTVKPS 
ACHEINGKAP ILALGGDVMA HVLAFLEPPK ILEVITAPLS KDWLNAFSHQ SELWRVLCLQ 
EPLKARIENE PDSDDESFTG SFSSITGSQH RLTFGKFRLL YTAFVRCMKY LARIKDDASN 
GRPLSVVDYG VADGMGSHDI GSNQNLRQFL ARSRGVSFLT GQNEQADTPH SGSRHHAFAT 
ITQSIGVSDN GSATKSKRKH KEEEECMAVK KMRRFASGPS ALTQRLLGPP STGTPGNTEL 
PWSCAIFSIV NWMLAFSDVE GIQTMCLRDL PSLLEDEQQR ITAQRAGLTD VVLRAMVTFP 
DSSPLHTAAF HTIVLLARPL GGREGMLFHT SMVNSSGIFS ASSVASRNGK SGIAVMLDSM 
KRFQQDEVLQ AMSCWSLVNI ALAPAQKEVL VNLGGIEVTS RAMCAHPHSA EVQFRALFAL 
INLVIPSRDQ GEPLRGEVIT EKEMLDESVD QIIHLVLLAM KNFCASEAIV NRACLVLHNV 
SLTREYHETL LCCPNCYQML EWCLANYPTD QVLQQSASGT LHRLQLTLNS DEILRTRFAT 
TLQAQQQMSL ENVHREAIVA HEQHAQSRTI