| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43213 |
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| Symbol | |
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| ID | 7196577 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2333244 |
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| End bp | 2336538 |
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| Gene Length | 3295 bp |
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| Protein Length | 819 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176960 |
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| Protein GI | 219110417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTCAACACC TATCTGCATT CCTCTTACAT CTGAAAGTTT CCTTTTCCCA TGCGTCTTCC
AGCTGGCAGT AGATGCTGTT TATTGATCGC TTGCCGAGAA GGATGCGATA CGATAGCTCC
ATCTATAGCT ATGTCATTCG TAGAGAATCG CACCGGATCG AAAACGAAAC GTTTAGTCTC
TTTACTGCAA AAAGGAATGT TGCTTCTGAT TACTGTGGGC ATTCTTGTCA CGATCTTCGA
TCTCCTAACC TTCAAAGGTC TCCGCAGCGA GCATCTTCAG ATAGCAAACG AGTCTCATCG
TTGGAAAAGA TTATCGGACA CCTGTAGTGG TAAGGAACCT CTTTTGGAAC TAGTCACTCA
AGCCGTTGGA AATGTTTCTA TGGCACAAGC TTATATTCAG GACAACTGCA GAGCTTTGCC
GACGTGGAAA GGCGTCAGCA ACTTGTACGG ACCTACGCCC GTCATTCTAG GTCTAGAGCA
CTGTGAAGAC TTTCGCAGCA ACCTTAATCA AGCGAAACCG CTCGGTGGCC TGAAAATTGC
GGGCTTCTTC AACTCGGGTA CCAATGCTAT GGCACGAACG CTTATGGAAA ATTTGAACGA
CGGAAAATAT GGTAGCCGTG CGACTTTGGA GTCTACTATT AGAGCGCAGG GAGTTGTGAC
TCAAGTACCT TGGGGCAAGC ATCGGTGGAT CTTGGCAGAT GAACTGGCTC GCTTGTCTCA
GCCTGATATT CTACCCGTGG TAGTGGTACG TGATCCGTAC CGATGGATGC AGTCAATGGT
AAGCGAGATA TGCGGGAGCT ATTGGATTAT GTCACTTATT GATTTTCGTC TAACTATGTG
TGTGTGCGTG CGTGTGTGTG TGTGTGTGTG TTCTCCATTT CTTGTTCTTT CCAGTGCAAG
TCAACGTACA CTTTAGTCTG GGATCGGGGA CTTGCGAATC ATTGTCCAAA TCTTGTGCCG
TCCAACAATA AAGAGATGGA GATGAATGGA AACCGCTCTT CTTTTTCGGT GCAATTGACG
CAAAGTGTCA CCAGCACTCA CCATTCGTTG GCGTCATTGT GGTCCTCTTG GTACGGATCG
TACTTCCGCT CAAGTTCTCC GCGGCTAATT GTTCGCATGG AAGATTTAGT GTTCCACGGG
CCGGAACTTG TGCGTCGATT GAGCGACTGT GTTGGAATAG ACCGTGTTCA GCCCTTCGTG
TTTCTTACCG AAGCTGCCAA AGATCACGGC CGGTCAACCG ACTTGTTGAC AGCCATAGTC
AAATATGGTA GTTCGGAAGG GCGTTACAGT GGCATGATGG TGCAAGACTT AGTTTACGCG
AGGGATGCGT TATCGGCTGA TCTTATGGAA ACATTGCACT ACCAATACGA CAGTGTCTAG
CACACTAGGT AGTAGAGCTG GCCAGGGTCC GACCCTGCGA GGAGAAAAGT CATCGCTCTG
TAGAGAGAGG GAACGGAACT AATAGGAAGT AATGTAACAG TAAGTAACCT ACTAGAATGC
TGGTGGTAGG GGTAATAACG GACCGATTTT TGAAAAAGAA GACTCATTCA CTGCCAATCA
TGTTACGCGA CGACGATGGA CAGACAGGAG TAGAATTTTT TCCGTGCACC TTCCGCGCCA
CATGTGAGGT GATGTCGGCG CCCTCTGAAA TAGGATGCGC TTTCTCGAAT AACGGTTGTG
TCAACCCCTC GCGATCTACC AGACGTGACG CGACTAGCGA ATCGAGAAGC ATCGAGAGGA
TAGTCGCTCG CAGTCAGCTA ACATCACTTC CACAACTTGC TACGCTGGTT TTACTTCCAT
CCCTAGGGCA CACATTACTT ACCCGTCTTT TCCTCGAAGT CATTGTTGAA CGAGAAAATC
AGAATCAGAG GAATGGTGAA CGAAACGTCT TCCCTCCTTC GTCCCGCTGA CATTTCGGGT
TCCGGCCCCG AGAGACAGAC GACTGGACAC GATCCCATCA AACCTGTAAG TTTCGTGCCA
TACTATGAAC GTCGAAGACA AAAAAGAGGA ATCTCACCCT TGACGATTTT CAGCAGAGCT
CTCAAAGCGG ATTCCCCCCA GCAACAGTAC TACTTGCGCT GTCGACAATT ATCTTGCTCG
CATGCGGCTT GCGATACTAT CCCACATCCC AGCAGCAACG ACAGGTTTCT GTGGCCTTTC
TCGGAAATTC CATGTTTTAT TTCAACGATT TTCCGCGCTT CCTTGTTGAG TTATCGGACA
ATGGCATTCG TCAAGATTCT TGCTTGCATG GCGGGGCCAG TATCCCCAGT TTGGTACAAC
AAGGCAACGG AATGTTTCCA CAGTTTCAGA CACCAGCCGC GATTTACGCC CAATCATCGG
ACGGCTCTCC TATCTTTGAC TACGGTGCAT GCTCGGCGAA AATGCTGTTG ACGGGGACTA
GCATTTACAC TCCTGAACAG TACGAACGTT TCAACGAGAC GGATGGGATG GTCAAGAACC
CTTGTCGAGA AGATTTAGTC TTCACCAGTT ACATCGAGAA ATACTACGCC ACCAACAAGC
CAAACTGGGA TTACATCCTC ATCAACGATA ATACTCGCAA TCCAGCTCGC GGCTCGACGC
GCCAAGCTTC GTTGCAAACC TTGCAACATT TCTATATTCC GTGGCTCCAC AAAACTGGAG
CGACGCCAGT CTTTCTGTGG ACACACGCAT ACTCGGTCGA GTCCACACCT AAACGCAACA
TGACGGGTCT AGACGATGTG GCAAATTTCA CCTCTTTGAC AGGCGCTGGA TACCGCGCTT
ACGCGGAATT CTTGCAAGCC CACTTGCCGC CAACCCAGAA GCCACGAATC GCACCAAGTG
GACTCGCCTT TTTGACGGTC TACGAAGAAA ATTTGGAGAT GTGGAAGAAA CTCTTTCACA
ACGCCGACCA TCTGCATGCC TCACCGCATG GTACCTTTTT GCAGGGATGT GTTGTTTATC
ACACGTTGTT TGGAAAAATG CCGGATCGGG ACGTGGTAAT TCGACGTGAC ATGGGATCAT
TATGGGCCAC GGCTCGAATG ATGCAACACT CCTGGGAACC GCCGAACCCT ATGCTTCACG
AAAGGGACGC AACTTATCTG TATGATGTTG CCGAACGCGT CATGAACGGT CATGTTCCGG
AGACTTACAT TGAGTACAAT CGGGGAGAAG TTGCTGATAC TGGCGATGAT TCCTGACTGT
ATGTTGCTGC CGGAATATAG CTCCGCGCCA GCCTAGTACA GGAATCTGGC AATCATCCGT
GTTATGCAAT TGCGTGTGAG TGTAAATTTA ACTCATTTAG ATTGATTGTT GAGTG
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| Protein sequence | MRLPAGSRCC LLIACREGCD TIAPSIAMSF VENRTGSKTK RLVSLLQKGM LLLITVGILV
TIFDLLTFKG LRSEHLQIAN ESHRWKRLSD TCSGKEPLLE LVTQAVGNVS MAQAYIQDNC
RALPTWKGVS NLYGPTPVIL GLEHCEDFRS NLNQAKPLGG LKIAGFFNSG TNAMARTLME
NLNDGKYGSR ATLESTIRAQ GVVTQVPWGK HRWILADELA RLSQPDILPV VVVRDPYRWM
QSMCKSTYTL VWDRGLANHC PNLVPSNNKE MEMNGNRSSF SVQLTQSVTS THHSLASLWS
SWYGSYFRSS SPRLIVRMED LVFHGPELVR RLSDCVGIDR VQPFVFLTEA AKDHGRSTDL
LTAIVKYGSS EGRYMSSTLG SRAGQGPTLR GEKIRGMVNE TSSLLRPADI SGSGPERQTT
GHDPIKPTKK RNLTLDDFQQ SSQSGFPPAT VLLALSTIIL LACGLRYYPT SQQQRQVSVA
FLGNSMFYFN DFPRFLVELS DNGIRQDSCL HGGASIPSLV QQGNGMFPQF QTPAAIYAQS
SDGSPIFDYG ACSAKMLLTG TSIYTPEQYE RFNETDGMVK NPCREDLVFT SYIEKYYATN
KPNWDYILIN DNTRNPARGS TRQASLQTLQ HFYIPWLHKT GATPVFLWTH AYSVESTPKR
NMTGLDDVAN FTSLTGAGYR AYAEFLQAHL PPTQKPRIAP SGLAFLTVYE ENLEMWKKLF
HNADHLHASP HGTFLQGCVV YHTLFGKMPD RDVVIRRDMG SLWATARMMQ HSWEPPNPML
HERDATYLYD VAERVMNGHV PETYIEYNRG EVADTGDDS
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