Gene PHATRDRAFT_43168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43168 
Symbol 
ID7196919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2218231 
End bp2219101 
Gene Length871 bp 
Protein Length282 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177471 
Protein GI219111439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0764415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTG AACGCTATCC ATGGCTGAAG GACCTGACTA CGGCCGACGC TCTCCGAGAA 
ATTGCCAAGG CGCGGCGGCA GTATCAGAGC CAAGGCGCCT TTCTTTTTCC TTATTTTATT
CGCCCCGACG TCTTGGAAAA GTGTTGCTCC GAAGCTCGGG CCCAGGAAAG TGAGGCCTTT
ACAACCGACG ATCACCACAC CGCCTATCTC GGCCCTCAAA ACTGTAATTA CCCCGAAAAT
TCCGTCGTGA ATCACAAAAT GAAGACGCAA GTGGCGTCCA TCGCGTACGA CGAGCTCCCG
CACGAAAGTT CCTTGGCATC CTTGTATAAC GATGAGACTT TACTGCGATT AATTTCTCTG
ATCGTTCAGA AGGAACTATT CCTATCTGAC GATCCATTGG GATGCTGTTC GATCAACGTG
TTTAGGCCCG GATACCACCA TTCCTTTCAC TTTGACGAGT CGGAATTTTC GACGACGCTC
ATGTTGCAGG ATGCGGCAGA CACCGATTCG GGACTCTTTC AATACACGGA TCCTTTGCGT
CAATCCGCAA GCGATCCGGC GCTCGCTGAC GTTGCTGCGA TTGTGCAAGC CTACGATCAC
ATGAACGAGC CGCCTCACGG AGGCTTTCAC GAGCACGATG CTGCCCACCG CGCACCAACG
TTACACACCC TCGATTTCCG TCCTGGAACC TTGTCCCTTT TTTCCGGATC CAGGTCATTG
CATCGTGTGA CCCAGGTACG AGGATCCCGG TCCCGACTAG TAGCTGTATT AACGCTTGCC
ACGCAACCAG GTTTCCGCAA TTCGGTCGTG GTGCAAAAAC TGTTTTGGGG ACGCAGTGTT
TCGGGCTGAA GAAAAATGTA GGTGAATTTT G
 
Protein sequence
MNFERYPWLK DLTTADALRE IAKARRQYQS QGAFLFPYFI RPDVLEKCCS EARAQESEAF 
TTDDHHTAYL GPQNCNYPEN SVVNHKMKTQ VASIAYDELP HESSLASLYN DETLLRLISL
IVQKELFLSD DPLGCCSINV FRPGYHHSFH FDESEFSTTL MLQDAADTDS GLFQYTDPLR
QSASDPALAD VAAIVQAYDH MNEPPHGGFH EHDAAHRAPT LHTLDFRPGT LSLFSGSRSL
HRVTQVRGSR SRLVAVLTLA TQPGFRNSVV VQKLFWGRSV SG