Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43168 |
Symbol | |
ID | 7196919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2218231 |
End bp | 2219101 |
Gene Length | 871 bp |
Protein Length | 282 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177471 |
Protein GI | 219111439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0764415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTTG AACGCTATCC ATGGCTGAAG GACCTGACTA CGGCCGACGC TCTCCGAGAA ATTGCCAAGG CGCGGCGGCA GTATCAGAGC CAAGGCGCCT TTCTTTTTCC TTATTTTATT CGCCCCGACG TCTTGGAAAA GTGTTGCTCC GAAGCTCGGG CCCAGGAAAG TGAGGCCTTT ACAACCGACG ATCACCACAC CGCCTATCTC GGCCCTCAAA ACTGTAATTA CCCCGAAAAT TCCGTCGTGA ATCACAAAAT GAAGACGCAA GTGGCGTCCA TCGCGTACGA CGAGCTCCCG CACGAAAGTT CCTTGGCATC CTTGTATAAC GATGAGACTT TACTGCGATT AATTTCTCTG ATCGTTCAGA AGGAACTATT CCTATCTGAC GATCCATTGG GATGCTGTTC GATCAACGTG TTTAGGCCCG GATACCACCA TTCCTTTCAC TTTGACGAGT CGGAATTTTC GACGACGCTC ATGTTGCAGG ATGCGGCAGA CACCGATTCG GGACTCTTTC AATACACGGA TCCTTTGCGT CAATCCGCAA GCGATCCGGC GCTCGCTGAC GTTGCTGCGA TTGTGCAAGC CTACGATCAC ATGAACGAGC CGCCTCACGG AGGCTTTCAC GAGCACGATG CTGCCCACCG CGCACCAACG TTACACACCC TCGATTTCCG TCCTGGAACC TTGTCCCTTT TTTCCGGATC CAGGTCATTG CATCGTGTGA CCCAGGTACG AGGATCCCGG TCCCGACTAG TAGCTGTATT AACGCTTGCC ACGCAACCAG GTTTCCGCAA TTCGGTCGTG GTGCAAAAAC TGTTTTGGGG ACGCAGTGTT TCGGGCTGAA GAAAAATGTA GGTGAATTTT G
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Protein sequence | MNFERYPWLK DLTTADALRE IAKARRQYQS QGAFLFPYFI RPDVLEKCCS EARAQESEAF TTDDHHTAYL GPQNCNYPEN SVVNHKMKTQ VASIAYDELP HESSLASLYN DETLLRLISL IVQKELFLSD DPLGCCSINV FRPGYHHSFH FDESEFSTTL MLQDAADTDS GLFQYTDPLR QSASDPALAD VAAIVQAYDH MNEPPHGGFH EHDAAHRAPT LHTLDFRPGT LSLFSGSRSL HRVTQVRGSR SRLVAVLTLA TQPGFRNSVV VQKLFWGRSV SG
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