| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43168 |
|---|
| Symbol | |
|---|
| ID | 7196919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2218231 |
|---|
| End bp | 2219101 |
|---|
| Gene Length | 871 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177471 |
|---|
| Protein GI | 219111439 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0764415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTG AACGCTATCC ATGGCTGAAG GACCTGACTA CGGCCGACGC TCTCCGAGAA
ATTGCCAAGG CGCGGCGGCA GTATCAGAGC CAAGGCGCCT TTCTTTTTCC TTATTTTATT
CGCCCCGACG TCTTGGAAAA GTGTTGCTCC GAAGCTCGGG CCCAGGAAAG TGAGGCCTTT
ACAACCGACG ATCACCACAC CGCCTATCTC GGCCCTCAAA ACTGTAATTA CCCCGAAAAT
TCCGTCGTGA ATCACAAAAT GAAGACGCAA GTGGCGTCCA TCGCGTACGA CGAGCTCCCG
CACGAAAGTT CCTTGGCATC CTTGTATAAC GATGAGACTT TACTGCGATT AATTTCTCTG
ATCGTTCAGA AGGAACTATT CCTATCTGAC GATCCATTGG GATGCTGTTC GATCAACGTG
TTTAGGCCCG GATACCACCA TTCCTTTCAC TTTGACGAGT CGGAATTTTC GACGACGCTC
ATGTTGCAGG ATGCGGCAGA CACCGATTCG GGACTCTTTC AATACACGGA TCCTTTGCGT
CAATCCGCAA GCGATCCGGC GCTCGCTGAC GTTGCTGCGA TTGTGCAAGC CTACGATCAC
ATGAACGAGC CGCCTCACGG AGGCTTTCAC GAGCACGATG CTGCCCACCG CGCACCAACG
TTACACACCC TCGATTTCCG TCCTGGAACC TTGTCCCTTT TTTCCGGATC CAGGTCATTG
CATCGTGTGA CCCAGGTACG AGGATCCCGG TCCCGACTAG TAGCTGTATT AACGCTTGCC
ACGCAACCAG GTTTCCGCAA TTCGGTCGTG GTGCAAAAAC TGTTTTGGGG ACGCAGTGTT
TCGGGCTGAA GAAAAATGTA GGTGAATTTT G
|
|---|
| Protein sequence | MNFERYPWLK DLTTADALRE IAKARRQYQS QGAFLFPYFI RPDVLEKCCS EARAQESEAF
TTDDHHTAYL GPQNCNYPEN SVVNHKMKTQ VASIAYDELP HESSLASLYN DETLLRLISL
IVQKELFLSD DPLGCCSINV FRPGYHHSFH FDESEFSTTL MLQDAADTDS GLFQYTDPLR
QSASDPALAD VAAIVQAYDH MNEPPHGGFH EHDAAHRAPT LHTLDFRPGT LSLFSGSRSL
HRVTQVRGSR SRLVAVLTLA TQPGFRNSVV VQKLFWGRSV SG
|
|---|
| |