Gene PHATRDRAFT_43159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43159 
Symbol 
ID7196914 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2193158 
End bp2201014 
Gene Length7857 bp 
Protein Length2413 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176930 
Protein GI219110357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAT GCCAGACGCT CTGGGCTTTC CCTTTGCAGT TAGGCTAGTG TACTATCTAC 
TATTTAGGCC CACATTGGCG AAAGCGTGGG TGTGGGTGTG GGGGTCTGGA CCGCAACCGC
AACCTCCTGG AGAGAATCTC TGTGGGTTCC CGTTGCGCCG TGCCCACGTC CTTGCGTGTT
GGACGTTGTT TCCCGGTATG GTAGCTCGAA GCATTGCGAC TTTCCACTAT TACTACCAAC
CACCAACTAC TTCTGCTACT CGTACGAGCA TTAGCATTAG CACTAGTACG ACCTCCTTCT
CAAGGAGTTG GGGATAACGA ATCGCTTCCA GTTCGTTAGC AAAAGCAGAG ATCAGGCCGT
CTCCCACCCC GCTTGTTCGT GTTGACTGTA AAGAAAGACG TTGCGCACCG GACGACCGCT
ACGGATACGT TTCGTTACGT TACGTTAATT TTCTACCACC GCCACCACCA CCACTACGAA
CGATACGATA CGATACAATT TCATACAATA CAATCCACTA CGATCGTGAC AATCCCTCCC
GTAAGTCGTG TCATGGAGTC GACGGCAGCC AACGAGACGT CCGTGAAAGT CGTCGTACAG
GACCAACACG AAGAAGTGCT CGAACCACTC GAGTCATTGG AAGTGGACCT TGACAACGAT
GAGTATGCCG ACATTATCGA CGGCGATGAT TCGGTCCAGC CAGAATCCTT CCCGCCTCCG
ACACCAACAA CACGCCAGGC ACTGAATGAT TTCGAACCCA CCAACAGAGA GTCGGACGAT
GACAACAACC ACAACAACAA TACCGAAAGC CATACTCGTA CCGATCACCA CAATGCAAAG
GCGGGTGCTT CAGAGACGGA ACCGGCCGGA GAAGATGATC GGCAGCTCTC GGCATACGAA
CGCTTACGAC TGGAACGTAT TCGCCGCAAT CAACAAAAAT TGGCCCAACT CGGACTCGAA
GGAAGAACCA GCGCCGCCGG AGGCTGGGGT CCACGTTCGC GTCCCAAAAA GCCCAAACTC
TTGCGGAAAA AGGCCGACGA ACCCGCACAG CAACGATCCA GTCTATCGCG ACGCACCAAA
ACTGAACCCA AAAATTACGC CGAACCGCCA AACTCCGTAT CGGCCTTGTT GCGCAAACAA
GGCGAAGAAG CGGCCGCTGC GAAAAAGGAT CAACCCTTGG AGAAGAAAAA AACCAAGGAT
CTGAGTGAAC GGATGGAAAG ATTTGTGCAC TTGGAGTTCA AGCGCATCCG TGGTCACAAA
ACACTCGTAC ACAAACAGGC GAAACGAGAC CTCCGCCAGG CCGAACGGGA ACTGAAGTAC
TGGAAGTCCA TCGCGAATAA GCAAAAACGC CGAGAAATGC GCAAAGCGGA AAATAGACAA
AGTCTCAAAA CGAAACAGGA AGAAGAACGA CGGCTCTTGG GTGGAACGAT CAAGGAAGTT
TTACAACAAA TCGACGCGCG GATGCCCGAA CTCGTCCAGG CGGCTGCGGA ATACGACGAC
AAATATGAGG TACATACGTA GATTGGCAAC CCCAACCACA ATTGTCTAGT AGGAGATGGA
ACAGACTAAA TCACTCACCA ACGATCATTA TCTTGGTGGC CTTGCTTGTT TGCTTACCAA
CATTAGGCGG AAGACCGGCG TCAAGCACGT GAGCTTAAGC GCTTGGAGAA CGAACACCGA
ACGAACTTGC TGGATTCTCT GGATCGCTTT CCAAAGGCCA TTAAGGTACG TGTAGCACAA
ACCGAACGGG ACCCGCAAAT TGGTTGCCGA TCAAGTCTTT AACGCTGTGT TTTTTTTTTT
TGCGCAGTCC GCAGTATCGC TCTTGAACAC GACATTACTG GACCGGGCTC CACGAGAGCC
AGCACCGACC CGTCGAAGTC GTAGATCCAC TGCCGAGGAA ATCGTCACAC CCCTAAAGTT
AGCACAGAAT CAATTTACTG CCAATTCTCC GGAAGAAGAG GATACGTACC GAAACGTTGC
CGACAAAGAA GCAATAGCCC CGGAGGACGA TGAAACCTCT AACGGAAGAG ATCGGCCTGG
TACGAAACGG AAACGAAATG CTCGGAATGT TGGTGGCTGG GTTTCTCCTC AATTTGCGTT
CGAGATTGAT AGATCATGGC TTGACCAGGA CAACACAAAA GCGCACTTTG ATTTGTATTC
ATACGTACCA CAAACTGGGG ATACTGTGTT GTAAGTTTAA AAAGTATTAA ATCGGGGCTT
ATGTTATTCA ATGGCTGGTC CAATTGGTTT GCTCACACCA TCAACGTTTT CTTCGACCAG
ATACTATCCA GCCGGGCATC GCGCATATGT TAAAGACTAT CCCGATATCC TGGGAAAAAA
GACGAGGCAG ATTACTAGAC TTCCTCTTTG GGAACGCGCG GTCATTGAGC GGGACAAAAT
AGACAGAGGC GAGGGGCCCA AAACCGGTGA CAGTTCCTTG AATGTTTGGT GGACGGATGA
GTGGTTGGAG GGCATCGAAG GTGACCTGGG AAAATATCCA ATACTATGTC GAGTTCACGC
CACAAATGCT GAATTTCCGC CGGATCGATT CACTAAAGTA ATAAAAAAAG GGGAGATTTC
TTGGAAAGAT CCTAAAGAGC AAACCAAAAG AACGAAAGAA TCATCAAGAA CACCTCTACG
ACTGGCCGTC ACACTACGGC CGTTGGCACC GGTTGTTCCT CCTCCTAAGG AATCCAGCGG
CGATGCCTTG GCCAGCAGTA CTCAACCAGA TCTGCTCCCA TCACGTTTCA AGGATGACCA
ACCGTTGGCT CTTCCTCCAT TCTTCACAGT TGTGACGTTC CCTTCGCAGC AGAAGCCGTT
TATAGTCCCT TTTGCATGGG CTTACTCGAT TTCCAATTCG CTTTGCCTGG ATCAAAGCGT
AGTAGAAAAA GGAAGGGAGG CTTCAAAGTT GCACGTCCGT TCCTTTGATA CCCTATCCGA
CACTTCATAT TCTCGATTGG ATGACAGAAT TGAGGCTCTG CAAGTATTCT TAAAAAAATG
CACCAGAGGA CCACGCGGAA AATTGAGTTT GCCGACCGAT TGTTTAGAAT CAGCAGGGAT
GCTGTCGCTA GCAGAAACAA ATGTGTTGCT TGATTTCTTC GACCATTTTG TAAAAGACAG
ACAGTCTGAT GTTTCTGATA CCCAAGCCGT GGTAGGTTTT TTTAACTTGG TCAGGTCCAC
ATTGCCTTTA TGGAACGGCG TCTCTGTTGT CCACAGCCCG GACGAGAAGA AAGACAGGAA
GATCTCACCG TGGGACCTCT CCCTATGGAA GAAACGAATG ATGATTCCAG ATTATTCGCC
AGATAATTTG TCAGATGCGT CGTTGTCGAT GGACGATCGA CTGCGGGATC GGATAGAACG
CGTAATCGAC GACATAGCAA AGAATGACTC AAATGCAGAA CTTTTCCGGT CTCCTGTAAC
CGAAGAAGAT GCTCCCTCTT ATCCCTGCGC CGTACCTCTT TCAATTTCTC TTGACAAAAT
TATTCGTCGC TTGAAAGGGG GAAAATCTGG CAGTCAAAGG TGCTATTATC GGAATACGGA
TTCACTTCTG TCGGATGTAA GTTCGCTTTT GGAGAATTGT CTGCTGTACA ACAGTCCAGA
ATCATCACTC GTTGAAACGG CGGTGGCGCT CGTTTCAAAA ATAAAGGATG AAATTTCTCG
GGTTGCGAAA GACCATTTTA AAGAAGTGAT ACAAGCAAAA AAGGCGGACG AGGAAAGAAA
AAGTCGTATA CTTAGGCATT GTGAGGCTGT TGATCCTGCT GAAAACTGCG GCATCACGGA
TAGTCTGAAG GAGCTGTATG TCATGAGCTC CATAAGGAAG CCTTACAAAG ATCAAATCGA
TTTAGAGTGG CTGCAACAAA CGACAGAGAT CGTTGAGAAT CGAGACACCG GCGTTTCTAC
GCCACATCGA AGCTGGGTGC CGCAAGCTGG CGATGATATT CTATACTGCC CTTCACTACA
TTCAGAATTT GTCAAAGCTC ACTTTAGCTC ACTTGAGCCC TATCAGTGCA TCGTGCACAA
TCTGCAAGAC TACAACCTAA AAAACAAGAA TGAAGCCGCT GACGACTCGA CCGCTTTAAC
GAAAGAAGGA TTCAGTGACA AATTTCTAGA AGGATGGGTG AAAGGTCGCG TGATTTGGGT
ACGCAGCTCG TTCCCAAAAT ATTCAACCAA GAAGGATGGC GTGGAAGCAA AAACGTTTCC
TTCGAATTCG TCGATTTTGG TGGCGGGGAT CAAATTGGAG CCTGATTTTG ATGACACCAA
GCCTCGGATT ATCTGTTGGA GGCCTTGCAT ATTTGATTAT TCTGTCTGCA AGATTTGTGG
TCTATCTACA CAATCGTTTT TCAAGCCTTG CGACGGGAAC GATGAAGCTT TTGAAGAATC
AAAGCTGTCG CTTTCGCTGA TTGAGCTGCA AACGATAGAT CGGTGTTTCA ACTTTCTCAA
GAAACGCTGC ATTCAAGGAA CCGAACCAAG CTACATCGAC CATCAGTTGA CTAGAGCAAA
TGTTCGACAA GGCTATCTCC CTCCGTCTGG CCGGTCCTCT GCAAAATCAC TTCCCGCTTT
TGAGCTTGCT TACAAGGACG CGCAAAAGGC GAAGGTGAAA GGCACAAGAG GGGCAAAAGT
ATCTGTGTGC CCTGGGATTC CGGAGGCATT GATACGGCAT CTCTTAGATT TTGGATTTCT
TGCTCCTTTT GTACTCTCGT CTGGGAAAAG CAACAAGGAA AAGTTACACA ATGACGGCAT
GATATCGCCT TGGCCAAAAA TGTCTCTAGA ATTGATACAC TCTCGGGTCA AAAATGGTTT
TTATCGCCAC CGGGCTGCAA TTCTGAACGA TGTCATAGAA GCATACTCTT CGGTGGTTTT
CCTAGTTCTA GTTGAAGCAG GCAAAAGAAA GCGCTCTCTT CTAAGTATAA GGCGTATCGC
TCGAGCTCTG GCAGCTTCTA AAAGTCATAG CAATGGAGAG GAAGAAACAG TGATGGTAGA
TACCAAGACC ATTGATCAAG AAGAAATTGA TCTACTCAAA CGGATCCGAA AAATTCGAGA
GCTATACGCA ACAGCTCTTG TGGTGGTTTC CGATACAATT CACAGCGAAA GGATTTTTGG
GTTGGTCGAC CGACCATCTC TGAAGCATAT ACCAAAATCT ACTGAACCGG TACTGGTTCA
GAGCCCCGAG CAGATACAGG CTAGGAAGCG GTTGGAATAT ATCCTATTGG CTTTGAGTCG
AGACCAGCTG CAAAACACTT TCCCGTCCAT CGAATCCAAC GGGACAACTT TTCCGACGAT
AAAAGTCAAG TTGTCTTTCG GCGGAAAGCT GCTGATGACC AAAATGCGTG TCAGTGTGGA
TAAGTTTGCC GTGGGCTTTT TGGGTACCAA AGAAGTGAAT TTGAAGATCA GGCTGAATGG
TCGGCAGTTC ACGATGGAGA GAGCCGCTCC ACAGCTTTTG ACAGGAAGCT CGGCTCTTAA
TGACCTGTCA ACAAACGATA CAAACACCCG AGATTCAACG AAAGTAGCGA AAGGCAGAGA
ATTTAAACAC GTTTTGTGCG ATTCTGTTTG TTTCGACCAC GAAGACTACG AAGGAAAAGA
TAGCCTCGTG AAACTTTTTT TCGGAAGACC TGGTAGACTG CATCCTTGTG CTAGATGTCA
AGCTTACCGT CGATCTCTAC TCAGTTGTCG TGTACGGCGT TCACATTCAA ATGTGGATTT
CGATTGGGTC GAAAATTTCA GCACTACCGG TGGACTGGAA AAGCTGTTAA AGCAGATGAA
CCCCGAATGG CCCGAATGGG AAGTCTGTGA GGTTGGAAAA AGCTCTACAG ACAACACTTT
AGCATCGGAA AAACCTCTAC CGTCTCCTTT AGAAGAAATC GAGAAAGAAG ATGGAAATGA
TAACGACGAC GGGGATGCCG ATGAAGACGG GGATCCCGAT GTCGAAGATG GAACCCAAGA
GGTCGATGAA GAAGAGGAGG AAGACGAGTT GGCGTTGGAG TTGGCAGACC CCCAGCAAAT
GATTGAGAAA GCTGAGAAGA CACTGTGCCT TGCAAAATCT GTTCAGCAAG AGGCTGACGT
ATACTACAAA GCTCCGGTTC GTTTGAGCAA AGCATTTGTC GAAACCGCCT TTCCGATCGA
CCCAACGGAC GGTCACTGCG TATATTGCAT TGTGTGTGGA CTGAGCGGCG ACCTGCTATG
CTGTGACGGA TGCGCTAACG TTGTCCACGG CAAATGTATT GGATTGACTT CGTTTCCAGA
GGGAGATTGG TTTTGCGAAG AGTGTCTTCA CAAGAAGTTG ATACAGAATG GCCTAGTAAC
CAATCGACGC CGGGGCAGTA GTGACGCTGC TCCTATCAAA GGCAATGGAG ACTTAAGGTT
AGCAGAGGAG AACGGACATT GTCCAAAAAC CGCTGTGAAG TTTGACGCAT TTGGTCGATT
CGAGTTCGAC GATGAACATG CAGAGAAAGT GTCGACGCTT CTAGACGAGC TACGTGCTGG
ACGGCCCGAG CAACCGCGAA AACGAAAACC TGCACCTGGT CAGTCATTAG GGTCAAACAA
AATAGCCGGA ATACAGCGAA GAGCAGAATT TTTGCAACAA CCTATTGTCT TGGGAGGTGA
ACTCTCCGGT CTTGTGCCGA TGGCACGGAA GTTTTTGGGT GCGGTGGGGA TTGAAACTGC
AGATGCCTTC CTTTCCATGC GGACCACTGA CCTTGCCAAA CGGTTCGCAA CATGGCGTCG
CAAGACTGGA ATGGCAAAAT TAAATGGAAG TGGGGAGACG GCATATGTCA GTTCATGGAA
AAGCGCGTGT CGGAAACTTT GTGGCGATAT TGAACACAAG ATGGTGTACC TATCCGATCC
AGGAGATGAC GACGACGACG GGTCTTATTC TAAACGAAAA GTGCGACGCC GAAAGAAGGG
CAAGACTCGC CCGAACACAA CAGGTAATCG ACGGCGTCGC CTTGATCTAC AAAGCCTTAC
GGATCCGTTA GAGGCTTTAA GCACCGTCAA CCAACAGTTT TTGGCCACCA TTGATATCTC
AACCGCGAAA GAATTTCTCA CAACTCGTAC GGGGGACATT GCGGAAGCAC TCGTCAAGTG
GCGAATAAAA GAAGGTCTTC CGCGCTTGAA AGGAAACGGA GAAGTAGCAA CAATCAGTGC
GGCAAAGACA TCCTGTCGTA AAATTGCCAG AGAAATGGGC TGGACAAAGG TAGCGGACAT
TGAATCTGCA GGTCGGGCAG TATTTCAGAG GAAGGAAATA CGTGAAGAGT CCAACCCGAG
AAAGCGAAAA CTCTCCACCC CACAAGTTGC GACTCGACGG CAAGCGAGTA AAGCTAGTGA
TGATGTTGAG TCCGACGTGG AAACCGAAAA TGAAGCTGAC GCTCCTAGCC AAGGAGAAAA
AAACGGCTTA TCAAAGGAGA AGCCGTTGGC GAAACGTCGG AAGCGAAACA CCGTCGAACC
AGTCGTTAAC ACGTCAGTCG CGGTCGTCAC TTGCGAAAGC ACAGGTGCGC GTGACATGTC
TCCAATCAAA ACCTCTTGCT CGTGATGCAC GTGCCAAGCT TCACACCAAC ACGAAGGTAC
CTCCACCGAC TCCGGTAGCC CGACGCCCTG GTATGCGGAC CTCTCGAACC CCCGACCGTT
TCGGTGTCGT TGCTGCGCCT CCGCAGAAGC GACGCCGAAA GGTTTCACCC AAAGACGCCG
AAGAGCCCAG TGAAGTTTTC GATCTCGAAT TCTCCGCTGC CACCAATGTG CAAAGCTTGC
TTTTGAAGCA AGTTCCCGGT AGGAGAAGAC GTTCCAGGTC CCGAAAGAAG TAGGTAGACG
TCGTAACAGT GGCTTTTCCT TTTTCTCAAT ACATTAGTTG TCTTCTAAGA GTTTTTA
 
Protein sequence
MDACQTLWAF PLQPTLAKAW VWVWGSGPQP QPPGENLCGF PLRRAHVLAC WTLFPGMVAR 
SIATFHYYYQ PPTTSATRTS ISISTNVAHR TTATDTFRYV TLIFYHRHHH HYERYDTIQF
HTIQSTTIVT IPPVSRVMES TAANETSVKV VVQDQHEEVL EPLESLEVDL DNDEYADIID
GDDSVQPESF PPPTPTTRQA LNDFEPTNRE SDDDNNHNNN TESHTRTDHH NAKAGASETE
PAGEDDRQLS AYERLRLERI RRNQQKLAQL GLEGRTSAAG GWGPRSRPKK PKLLRKKADE
PAQQRSSLSR RTKTEPKNYA EPPNSVSALL RKQGEEAAAA KKDQPLEKKK TKDLSERMER
FVHLEFKRIR GHKTLVHKQA KRDLRQAERE LKYWKSIANK QKRREMRKAE NRQSLKTKQE
EERRLLGGTI KEVLQQIDAR MPELVQAAAE YDDKYEHKPN GTRKLVADQV FNAVFFFFAQ
SAVSLLNTTL LDRAPREPAP TRRSRRSTAE EIVTPLKLAQ NQFTANSPEE EDTYRNVADK
EAIAPEDDET SNGRDRPGTK RKRNARNVGG WVSPQFAFEI DRSWLDQDNT KAHFDLYSYV
PQTGDTVLYY PAGHRAYVKD YPDILGKKTR QITRLPLWER AVIERDKIDR GEGPKTGDSS
LNVWWTDEWL EGIEGDLGKY PILCRVHATN AEFPPDRFTK VIKKGEISWK DPKEQTKRTK
ESSRTPLRLA VTLRPLAPVV PPPKESSGDA LASSTQPDLL PSRFKDDQPL ALPPFFTVVT
FPSQQKPFIV PFAWAYSISN SLCLDQSVVE KGREASKLHV RSFDTLSDTS YSRLDDRIEA
LQVFLKKCTR GPRGKLSLPT DCLESAGMLS LAETNVLLDF FDHFVKDRQS DVSDTQAVVG
FFNLVRSTLP LWNGVSVVHS PDEKKDRKIS PWDLSLWKKR MMIPDYSPDN LSDASLSMDD
RLRDRIERVI DDIAKNDSNA ELFRSPVTEE DAPSYPCAVP LSISLDKIIR RLKGGKSGSQ
RCYYRNTDSL LSDVSSLLEN CLLYNSPESS LVETAVALVS KIKDEISRVA KDHFKEVIQA
KKADEERKSR ILRHCEAVDP AENCGITDSL KELYVMSSIR KPYKDQIDLE WLQQTTEIVE
NRDTGVSTPH RSWVPQAGDD ILYCPSLHSE FVKAHFSSLE PYQCIVHNLQ DYNLKNKNEA
ADDSTALTKE GFSDKFLEGW VKGRVIWVRS SFPKYSTKKD GVEAKTFPSN SSILVAGIKL
EPDFDDTKPR IICWRPCIFD YSVCKICGLS TQSFFKPCDG NDEAFEESKL SLSLIELQTI
DRCFNFLKKR CIQGTEPSYI DHQLTRANVR QGYLPPSGRS SAKSLPAFEL AYKDAQKAKV
KGTRGAKVSV CPGIPEALIR HLLDFGFLAP FVLSSGKSNK EKLHNDGMIS PWPKMSLELI
HSRVKNGFYR HRAAILNDVI EAYSSVVFLV LVEAGKRKRS LLSIRRIARA LAASKSHSNG
EEETVMVDTK TIDQEEIDLL KRIRKIRELY ATALVVVSDT IHSERIFGLV DRPSLKHIPK
STEPVLVQSP EQIQARKRLE YILLALSRDQ LQNTFPSIES NGTTFPTIKV KLSFGGKLLM
TKMRVSVDKF AVGFLGTKEV NLKIRLNGRQ FTMERAAPQL LTGSSALNDL STNDTNTRDS
TKVAKGREFK HVLCDSVCFD HEDYEGKDSL VKLFFGRPGR LHPCARCQAY RRSLLSCRVR
RSHSNVDFDW VENFSTTGGL EKLLKQMNPE WPEWEVCEVG KSSTDNTLAS EKPLPSPLEE
IEKEDGNDND DGDADEDGDP DVEDGTQEVD EEEEEDELAL ELADPQQMIE KAEKTLCLAK
SVQQEADVYY KAPVRLSKAF VETAFPIDPT DGHCVYCIVC GLSGDLLCCD GCANVVHGKC
IGLTSFPEGD WFCEECLHKK LIQNGLVTNR RRGSSDAAPI KGNGDLRLAE ENGHCPKTAV
KFDAFGRFEF DDEHAEKVST LLDELRAGRP EQPRKRKPAP GQSLGSNKIA GIQRRAEFLQ
QPIVLGGELS GLVPMARKFL GAVGIETADA FLSMRTTDLA KRFATWRRKT GMAKLNGSGE
TAYVSSWKSA CRKLCGDIEH KMVYLSDPGD DDDDGSYSKR KVRRRKKGKT RPNTTGNRRR
RLDLQSLTDP LEALSTVNQQ FLATIDISTA KEFLTTRTGD IAEALVKWRI KEGLPRLKGN
GEVATISAAK TSCRKIAREM GWTKVADIES AGRAVFQRKE IREESNPRKR KLSTPQVATR
RQASKASDDV ESDVETENEA DAPSQGEKNG LSKEKPLAKR RKRNTVEPVV NTSVAVVTCE
STARRPGMRT SRTPDRFGVV AAPPQKRRRK VSPKDAEEPS EVFDLEFSAA TNVQSLLLKQ
VPGRRRRSRS RKK