Gene PHATRDRAFT_42902 details

Gene Information

• Locus tag: PHATRDRAFT_42902
• ID: 7196474
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1469998
• End bp: 1474979
• Gene Length: 4982 bp
• Protein Length: 1343 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002177298
• Protein GI: 219111093

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAA AAGGATCAAA TGATCCGCCT CTCGAAAAGA AACGGCGACT CTCTGTGAGA 
GATCTTCCCC AATTTTGCGA CACAGCCGGG ACCGTATCGG TCGCCAGTTT TGGAGCCCGT 
CGTTTGCCCG AGCTCCGCCA TCTGTGGGAG AAAACCTTTC GGCGAGCTTC TACTCCCGAT 
CCCAGTAATG TGGAATCATT GAAAAGTACA GGTTGTAAGA CTTCGCGTCG TCATTTGCGA 
CGAAGGGCCA CGAGCCATTT GGGCCGCAAG CATCATCGTT TTCCAGCTGG ACAGCAAGAC 
GCCAACGCGC AGGATAAGAA GTCGGAACAT TCGATTATCG AAGAGCCAAA GCTAACTCGC 
CGTAAACGAC GGCGCAACAC GGAACATTTG CACTCCTCTC ACGAAGAATG GAAGGTTCCT 
AAGGGAGCAT TGGGTATACC ATCGACAGAG GACAAGGAAT CGAATGGCAA CAATCATCGT 
CCTGATAACT GGATGCCAAC CCATCTTTGG CACGTGAAGC GATTTCACAT GGAATCTATG 
TGGGGCTGGA AAGTGCCCAT GCTGCATAGT AACCGAGGCG CGAAGGCAGC CTTGCGGCTA 
GCTCGCGAGG GGAAAACGAT CCTGCATGAC GCCACTTGGA CGTCTCAACC AGTTTGGCTG 
CGTATCGCGA CAGAGGTTGT CCCCGATATG ATAGACCAAA TACGGATCAT AATTCCTGAC 
TTTGCTTTGG ACGAGACAAA ATTGCTTGAA GCGTTTGCAT ATCAACCAAG TGCGTTTCCT 
AAAGGAGGCA TCGGCCCGGT TGCTTGGCTT TGCTCCACCT CACCTCTTTT TGGTAGTGCA 
AAAGACGACA CACAGAGCTG CTATATCTAC TTTTTTTTAC ACCCTTCCAT TCAGCAAACT 
CTGCTACACA TTTTGCGACA AATACTGGAG CCTTCGACTT TGACTGGGCC ACTCTGCTTT 
GTTCACGGGG GTCTATCGTG GTTAAGACTG CGTGGGAAGG CTGCCCTCGA AAGTCTCCTA 
ATGGCGATGC TTTCTATAGC AAAAGACGAA AAAAGAAGTA CGGACATTGG CGCCATCATT 
GCTGATTTAG AAACGGGTAT TGATTGCCAA CTCTCGCACG TCCAGTGCAG AGCAGCTACT 
AATCACGAAA CCCCTAACAG CCAAGAAGTC AAGCTCATCT TACGCCGTCC GGTACAAGTT 
GACTTCCATG GAAATTTTGG ATCTTGCGGT GTGGATGTTG TGTGCGAGCC TAGTTTGGGT 
CAGAAATTGC TGGTCGCTTT AGTTTTACAT GGTATGGCCT GTCCGATTGG TGTAACGGAG 
CTAGCGCACT TGGAGCTGGA ATGCGAACCT CCACGGCCGT TGTTTCCCCG GGACTATCCT 
GACACCTCAG TCGGGATGTC ATACTGGAAA GCAGCCCTGC CAGAATGGAA AATTTTACGG 
GCTTACTACG AGGGTGGCTT GGGAAGAATC CGACCAGATC GTACGTCTCA GCAGGTGTTG 
ATCTCGTGGA ATACGATACT ACCTACCGAC TTTCAATTGT TAGTCTCGGA GGATGAAACC 
ACCGTTGTCA CAGTGCGAGG TTCCTTTGGT CAACCCTTTC AGCAAGCCAT TAATGGAATA 
GGGTATATCC ATAGGAACGG GGACAAGGCG TCAAATAGTG GAGCAGCTGC AGAAAGTCTT 
GTCATTCGGC GGAGCCGTCG CAAGTCCGGC AATCCATCGT TACCCGTTCA AGCGCCACCC 
ATTTCTCGGG ATCAAGTATC GCAGCATAGA AACCTTTGCA AGACACTATT GCTGTCCTTG 
TCGCTACCGG CTGTCCTTCT TGCTCATATT TGCTTGCACG AAAAGGGACA ATTGGACACG 
GGTACACTTT TGTACGCCAC GGACGGTTCC GTCAATGAAC CATTGGGTGT CGTAACGGCG 
GCCATCTTTT CGTCTGGTCG GGGGCGGTAC CACGGGATTG CGGTGGTTGG TGCGGCGCGC 
CTTTTAGAAG CCTTGCAGCA CGCCCACGAC AGTTGCGCGG GTAGAATTGT AGCGCCGCGG 
GTTGGGCCCA AACGTATTGA ATTGGAAATT GGCGTCGCTA GGTCAAACAC CTACAACGAA 
AAGCATTCGA CAGCAAAGTT GACAATGTTT GGCACACTGT CGTTGCTGCT TTGATGGCAC 
ATCCGGTTCG GTTGTCGAAG TTGGGGCGGT GGGCCGCGTC TGGTGCGTAC GCAAGACAAC 
GCAGAGGTGG CGGTTAGATG GCCTAGTTTT TGCTTGCAAT GAGATTTGAA CTGAGGTCAA 
AGGTCCTGTA AACGTTTGAC ACACCATAAC TTTGTTTTGC ATACGCCAGC CACTTCCTCA 
AGAGGTAGGT GTAGTTTCTG TCCGCCATGG CAGAACTGGA TATTGACTCT CTAAAAAAGC 
ATAATTGTAA ACAACGAAAG AGTTGAAGTA CGACAACGAT GACGTAGAAC TGACGTCAAC 
AGGAGCTGTA CGTCAGTTCT ACTATAGCTA GCAGTAGCCA ACGAAAACGG CAAGAGATTT 
TGTTGACAGT GACACGCAAA TTTTCTCCGG TCCGGACAAT ATCGTCCCCG CCCATCACTT 
TGACAGTGAG CAGAATATCT ACACTGTTTA CTGGCACTGT TGAAGCTTGT GCTTACTCGG 
TGGCTTGTTG GACTACGACG ATGATAAAGG CATCGCATTT CTACTCAATT GCGGCAGTCT 
TCTTTGTTGG CGCACTGCGA CTGACATCCG CCTTCACTGT CGCCAACCCG ACGAGTGCGG 
CGCTCACTCC GGACGCGGGC CTCCAGGATG TCAAGCCCAT CCCAATCACA GTTTTGGCCG 
GTTTTCTGGG CTCGGGTAAA ACCACACTTC TTCAGAACTT GCTCGAGAAC AATGAGGGCT 
TGCGTATCGC TGTCGTGGTC AACGACGTCG CATCGGTCAA TATCGACAGC AAACTGGTCG 
CCAATCAGAA TTTGGCCTCG GGCATGGTGG AACTACAAAA CGGCTGTGCC TGCTGCTCAC 
GATCGGAAGA GTTGCTTGCC AGTGTGCAAG AACTCGTCAC CTTGAGCGAC ACACGAGGAG 
AAGGCGAAAG TTTCCACCAC ATCGTCGTGG AAATGAGCGG TGTGGGGGAT CCCCGCAGCG 
TCCGGGCCAA ATTCCAGGAA GCAGTCCTGT ACGATATGCG TAAGTGAGGA TGACGAAACC 
AGCAAGCAAA GATGGGGAAT GGGTTGTTTT GTGACCTGTC TCCGTATGGT TAAGATTTGT 
AAAATACTCG GGCTTTCGGA AATGTTCGTG CTCTAATTGC AATTTCATTA TCTTTTCATA 
GCTTTGATGC AACGTGCACA GCTCGATACC ATGGTCACGG TGGTAGATTG CAGTTCCTTT 
TTGACCAACT TGAACTCGGA CAAGGTTGCC ACGCCAGAGG ACACTCCCGA GTTGTACTAT 
CGCGACGAGG ATGAGGCCAA AGCTGATCGT AAGTGGATGG AAGATGACGA CTTACCTCCA 
GGTTTGTTAG AGGCGATCGA GGCCGGAGAT CGGGCATCGG CTAACGCAGT TGCCGATTTG 
CTCGTTTCGC AAACGGAAAT TGCTGATATT GTCCTCCTGA ACAAAGTCGA TCTCGTGGAT 
GAGAGCAGTC GTGATATGAA ACAGATCGAA AACATTGTTA CAGCTTTAAA TCCTCGGGCG 
ACTCTGCTCA AATCCGCGTT CGGAAAAGTT TCTCTACAAC AAATTTTGGG GGTGGCTCAG 
GGTATGGGAG TAGCGGAAGC AGGTATTATC GATGACCATA AAGATGCGGT CAATGCCGCG 
TTAGAAATGG CGCACGATCC TGATTGCGAA GATCCGAATT GTGTAGATCC CTCGCACTCC 
GAGGTTGTAG CCGTAGTGGA CTGCGCCAAG CCCGACTGCA CCGACAGTAG TCATGAACAT 
TCGCATACAC ACGCTTGTGA CGATCCGGCC TGTGACGATC CTGCTCATGC CAAAATGACC 
GTATGTGGAG AACCTGGTTG CACCGACAGC CACGAACACT CGCACACTCA CGCTTGCGAT 
GATCCAAGCT GTGACGACCC GGCCCATGCA AATACTGTCG CCGAAAGTGT CTGTAACGAT 
CCTGGCTGCA CTGAAAGCCA CGAACATTCG CACGCACACG CGTGTGACGA CCCAAGTTGT 
GATGACCCTT CGCATGGGGT TGATGTGGGC ACGCATGCCG GAATCGGAAC GTACGTTTAC 
ACATCGCGCC GTCCCTTCCA CCCTACGCGT TTGCTTTCCT TTCTGCGAAA TCTTCCTGCA 
ACGCGTGGTC TACCACCACT GGAAGCAGGC GAACCGGATT TGGCTGTTTC GGCCACCGCG 
AAGTCGGCAA TGAAGAAAAT TCTTCGAAGT AAGGGGTTTG TTTGGTGTGC GGATTCCTTT 
GAAGTTGCCC GCTACTGGAG TCACGCTGGT ATTTCGTTCG AATTAACCAA CTTGGGCAAA 
TGGTGGGCAA CACTACCACG TGAGCAGTGG CCGCAGGAAG CTATTCGTGC CATTTTGGCC 
GATTATGACG ATGCCAACCA CGACGACCAG AGCGCCAGTA CAGGAACTGT CGGTGACCGA 
CGTCAGGAAG TTGTTTTGAT CGGACCCGGT ATGGGTGGAC CCACGGCACA AAAAGAAGTT 
TCGTCAATTT TGGATAAGTG TCTTTTGCGT GATGATGAAT TAGATTTCTT CAACGAAAAG 
AAATTGGACG AAGGGGCATT GCAGAAAGCC TTTCCCAATC CAATCCAAGC GGGCATCATG 
ATATTTTAAC TCAGTGGGGA AGTGCACATA AGGCGTAGTA AGTTGGTAGT ATGTATCAGT 
GGACAACAGC GATTTTTTGT GAGGTTATGG GGGCCGTGCC CTTGCTATTT GAAACAATAC 
ATGGCTGCTT CTCGGAGTTC CTTAATACTA TCGTCTTCAT TCTCATTCAA AATTGTGAAC 
TCGAAAACTC CACATGATAT TCCGTATTCG ATTTCTTGGA CGATATCCCG AATCCTTCCT 
CG 

 

Protein sequence

MNSKGSNDPP LEKKRRLSVR DLPQFCDTAG TVSVASFGAR RLPELRHLWE KTFRRASTPD 
PSNVESLKST GCKTSRRHLR RRATSHLGRK HHRFPAGQQD ANAQDKKSEH SIIEEPKLTR 
RKRRRNTEHL HSSHEEWKVP KGALGIPSTE DKESNGNNHR PDNWMPTHLW HVKRFHMESM 
WGWKVPMLHS NRGAKAALRL AREGKTILHD ATWTSQPVWL RIATEVVPDM IDQIRIIIPD 
FALDETKLLE AFAYQPSAFP KGGIGPVAWL CSTSPLFGSA KDDTQSCYIY FFLHPSIQQT 
LLHILRQILE PSTLTGPLCF VHGGLSWLRL RGKAALESLL MAMLSIAKDE KRSTDIGAII 
ADLETGIDCQ LSHVQCRAAT NHETPNSQEV KLILRRPVQV DFHGNFGSCG VDVVCEPSLG 
QKLLVALVLH GMACPIGVTE LAHLELECEP PRPLFPRDYP DTSVGMSYWK AALPEWKILR 
AYYEGGLGRI RPDLSEDETT VVTVRGSFGQ PFQQAINGIG YIHRNGDKAS NSGAAAESLV 
IRRSRRKSGN PSLPVQAPPI SRDQVSQHRN LCKTLLLSLS LPAVLLAHIC LHEKGQLDTG 
TLLYATDGSV NEPLGVVTAA IFSSGRGRYH GIAVVGAARL LEALQHAHDS CAGRIVAPRV 
GPKRIELEIG VASKVDNVWH TVVAALMAHP VRLSKLGRWA ASATSSRVFF VGALRLTSAF 
TVANPTSAAL TPDAGLQDVK PIPITVLAGF LGSGKTTLLQ NLLENNEGLR IAVVVNDVAS 
VNIDSKLVAN QNLASGMVEL QNGCACCSRS EELLASVQEL VTLSDTRGEG ESFHHIVVEM 
SGVGDPRSVR AKFQEAVLYD MPLMQRAQLD TMVTVVDCSS FLTNLNSDKV ATPEDTPELY 
YRDEDEAKAD RKWMEDDDLP PGLLEAIEAG DRASANAVAD LLVSQTEIAD IVLLNKVDLV 
DESSRDMKQI ENIVTALNPR ATLLKSAFGK VSLQQILGVA QGMGVAEAGI IDDHKDAVNA 
ALEMAHDPDC EDPNCVDPSH SEVVAVVDCA KPDCTDSSHE HSHTHACDDP ACDDPAHAKM 
TVCGEPGCTD SHEHSHTHAC DDPSCDDPAH ANTVAESVCN DPGCTESHEH SHAHACDDPS 
CDDPSHGVDV GTHAGIGTYV YTSRRPFHPT RLLSFLRNLP ATRGLPPLEA GEPDLAVSAT 
AKSAMKKILR SKGFVWCADS FEVARYWSHA GISFELTNLG KWWATLPREQ WPQEAIRAIL 
ADYDDANHDD QSASTGTVGD RRQEVVLIGP GMGGPTAQKE VSSILDKCLL RDDELDFFNE 
KKLDEGALQK AFPNPIQAGI MIF