| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42893 |
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| Symbol | |
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| ID | 7196531 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1445003 |
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| End bp | 1447571 |
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| Gene Length | 2569 bp |
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| Protein Length | 766 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176790 |
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| Protein GI | 219110076 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCACCATGGC AGTCCCACAC GACGCTTCGG AAGCCCAAGA ATCCTCCGAA ACTTTGTCAA
CAACAACAAC AACAGCAACA GCTTCGGACG TGATCTACTT TTCGGCGACG GGAAGCGCGG
CTCACAAACG TTTGATTCCT TTAGTACCAG CCAGCTGGAT CGATGTAAGT CCCTACGCAC
CGGACGGACC CTCGCCGTCC ATCCGCGATC GCTGCCGGTC GAGACCGTCC ATGTTGGTCT
GTTGGGAAAA TTCTCCACGG AATGCAACCA AACCATATCG AGACAATTTA CAATGCTACT
CGCACTTGCC CAACGGTACG GCGATTCTCG ATTGCAAGTG GGTGTTGTCC AGACTTTTGG
GTAATGCTCG TCCTCCGGAC CCACCAAGAC TGTCCCAGAA GCAGCACCAG GAGGAGGAGG
AGAAGAATCA GAATATCGAC CTGGCAATAC TAGAAACCCA CTGTTTTCGG TCTGCTTCCG
GCTTTGAAGA TTTCGCCCGA AAGGTTCACC TCAAGCGACC GTCCAACTCA ACCAGTGCAC
GGATGCAACG GCATTCATTT CGAGACTTGT ACCCATCAGT ACCTGCGATG ACGAGTGTAG
CGCTCCTACC TCCTTCTTGC TCAAACCCTA ACTTGTGGGT TGTCAAGGAT GCATCAGCCA
ACGGCGCTGG TGGCGTTTGG GTGGTGGGGG CGGCCAATGC CGAGTCATTC GCCAGAGATG
GACCCCTGAT CGACACCCAC CGTTATGTGG CACAACGTTA TGTTTGGCCA CCAGTTTTGT
TCCAAGGCCG CAAATGTCAC GTCCGCGTCT ACGCCCTAAT CACCGCTGAC GGGAAAGCAT
ACGTTCACCA CCGAGCTTTT CTCCACGTGG CCAACGAACT GTTTTCAACC ACCGCGTACG
AAAACAACGG CGAGACAGCC TTCGAAGATG CCGTGCATAT CACCAACTGT TGCGCCAACA
GTCACAATCC GGAGAAGTTC GCCGGGGAAA TATGTGCAAG TTTCTTGGCA TCAGAATGGG
AGACCTTGCC TTGCGGACAG GGAGTGGTCC CCTTAGCGGA CTACTTTTCC TCGGTCCGTG
CCTCGGTAGC AGCTCTGGCA TTACGGACCG CACCTTATTT ACAAGGCGGT GTTGGGAATC
ACGGATTCGA GTATATGGGC TTGGATTTTC TCCTCTCTCA TAGTACAAGC GACGATGGCA
ATGCCAACGA TCGTCCTCTG GCCTATTTGC TCGAAGTGAA CGCCCCTCCC TCGCAAGACA
CTGCGACTGG GCTACCCCAC GCGGAAGACT TGCATGATGA GGTTCTTCGA GATTTGCTTT
CGCTCTGGAT TATTCCTTAC GTGACTCATG TTCCGTCAGT TCCTGGAGGA TGGCAATGCG
TGTACGAAAC TCCCTTGTCA TTTGAGGAAA AGGACGCGCC CACACCGTCG GAAGCCGCCA
TCCTCAACAA AATTCGTTGG GCCTTGTACG AGCGCAAATT ACTTGCTCAG GAAGAACAGT
TTAATTCCAA TTTGGCTTCG GACGATTTTA TTTCCCGGGC TCGACAGTGC TTTCCCTATT
TTGCCAACAC TTCAACCGTA TATTTCGAAA ACGCCGGTGG CACCCAAGTT CCCCAGCCGG
TTATTGCTCA CGTGTCGGCT AGTCTTCGAC ACCGAAATCG GGCTACCTCA GGTGCAAAAT
GCAAGGAAGT AGCCAGGCAG ACTCTGGGCA CGATACTCGG CGCCGGCTCC AAGTACGACG
TCTTCCTCGG TAGCAACGCA ACCTCTTTAT TACAATCGCT GGCGACTTAT TTCGTGCATA
CCAAAACCCT CCAGGCCGGA GACGAAATTG TTATTAGTAC GGAGAATCAT CGGGCGAATA
TCCAGCCATG GGTTGACGTG GCCATCATGA TAGGTGTGAC GGTAAAATGG TGGACAGCGG
TCGGTACACA ACAAAACTCG AGCGATGGTC GATCATCGCG TCACATTCGC GACCTTTTGT
CAGAGCGTAC AAAAATTGTG GCTGTGCCTC ATGCCTCCAA TGTGTTGGGA GAATTGAGAG
ATGTGCGTCG ATTGGCTCGG ATAGTTCGCA GCACCACGAC AAAATATGAT CGTATTCACA
TCGTAGTGGA CGGAGTGGCT GCCGTCCCCC ACATTTTCGC AGGACTTTCA GATCTCGACA
TCGACTGGTA TGTAGTATCC TGTCACAAAC TATTCGGACC GCATTTAGGA GCCCTATGTG
GCCGAAGAGA GACTTGCGTA GCACATCAGT CGTTGGATAC AATGCAACGC TGCCTCGAAA
GTGGCACCAC GTCATACGAA GCTTGTGCTG GTATTCAGGG TTTGGGTGAG TACTTTTCAC
ATATATCGGG ATACAGCTTG GATACCGCCG CGGGGCCGCC AGCATTAACC GAGAGTTTGG
TCCGGCGAGC ATACGATCAG ATACAAGCAG TCGAGCAACC CCTATCACGC TTGCTCCTTC
ATGCCGTAGC CCAGTGGTCC AAGGTGCGCT TGGTGACTGG AGATCATGGT ACCGGAACGG
TATTACGTCT ACCACTAGTA GCCATTCTCC ACCAGACGAT TTGCAGTAG
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| Protein sequence | MAVPHDASEA QESSETLSTT TTTATASDVI YFSATGSAAH KRLIPLVPAS WIDVSPYAPD
GPSPSIRDRC RSRPSMLVCW ENSPRNATKP YRDNLQCYSH LPNGTAILDC KWVLSRLLGN
ARPPDPPRLS QKQHQEEEEK NQNIDLAILE THCFRSASGF EDFARKVHLK RPSNSTSARM
QRHSFRDLYP SVPAMTSVAL LPPSCSNPNL WVVKDASANG AGGVWVVGAA NAESFARDGP
LIDTHRYVAQ RYVWPPVLFQ GRKCHVRVYA LITADGKAYV HHRAFLHVAN ELFSTTAYEN
NGETAFEDAV HITNCCANSH NPEKFAGEIC ASFLASEWET LPCGQGVVPL ADYFSSVRAS
VAALALRTAP YLQGGVGNHG FEYMGLDFLL SHSTSDDGNA NDRPLAYLLE VNAPPSQDTA
TGLPHAEDLH DEVLRDLLSL WIIPYVTHVP SVPGGWQCVY ETPLSFEEKD APTPSEAAIL
NKIRWALYER KLLAQEEQFN SNLASDDFIS RARQCFPYFA NTSTVYFENA GGTQVPQPVI
AHVSASLRHR NRATSGAKCK EVARQTLGTI LGAGSKYDVF LGSNATSLLQ SLATYFVHTK
TLQAGDEIVI STENHRANIQ PWVDVAIMIG VTVKWWTAVG TQQNSSDGRS SRHIRDLFIL
SQTIRTAFRS PMWPKRDLRS TSVVGYNATL PRKWHHLGYR RGAASINREF GPASIRSDTS
SRATPITLAP SCRSPVVQGA LGDWRSWYRN GITSTTSSHS PPDDLQ
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