Gene PHATRDRAFT_42856 details

Gene Information

• Locus tag: PHATRDRAFT_42856
• ID: 7196446
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1325975
• End bp: 1331557
• Gene Length: 5583 bp
• Protein Length: 1366 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002177270
• Protein GI: 219111037

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.875616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATAAATGTAG ACAGGAAACG ATCTGTAAAG CTGATATAAA TGCGGTGTAA TCATATGCAT 
ATGCACGCTC GTATACTGAC TTTCTTCGCC GTTCCTATTC CAGATGAGCA TTGGGCCCAG 
GAAATCAATC CGTACATACA ACGACACACT TACACTTAGG AAATAGTATG GCTGCAAGGA 
TTTTGACCAA TATTTTCACA TATTGCCTCT TTCCAAACAC CACATCTGAA CTCTTTTTGT 
AGAATTCGAC CATTGACTGT GGTGAACATT GCCGATCATC CTTTGAAAAA GCGTGATACA 
GTCCCCGACT CATCTGCTCG ATAGCAGGAA GGCGATCTCC TCTGACGAAA GTGATCTACG 
TACGTTTTGA TATTGTAGAA GAGAGAACAT TAATTGACTG CGATTGTACT CAGATCACTA 
CTATTCGACA AAGAAAGACT CACTTTGAAG AGTCCTACCT TAGAATAAGA AAAGAAATGA 
AGACTGAAAA TGGAAGAAAG CTGAACAGCT GGTATGTTCT GTTCTGTTTT GTGTCATCTA 
CAATGGCTGA GTACACCTAC TATGATAACG AAGGATATCA AGAAGGATAC AACACCAGCC 
ATACGATCAC CGGAGGTGAC GGCATGGAAT ATTACAGCAA TACCAGCAAT AGTGCTACCA 
ACAGTTCGGG AGGTGACATT GATTATTGGA CCAACTACGC CATCTTCCCT AAGCGATGCA 
TAGTTTAGTA AGTTTCTTCG ACCGGTGGCA ACTCCGTTCA CTTGTCCTCC TTCTTTTTGC 
CGCTCTATCT CACCTTTCCC GCACTGCCTT GTCCTCATCC TTGTGTAGCA AAAAGACAGA 
CTACATCATG TACGAAATGT TTGATCAGCA ATATTGCCAA GAAGAAAACC GATTGGGAAC 
CTACATTTCG CGCGTTCCTG ACTACATGAC GGGCCATCTG CAACAATTGG CCGAACAGAT 
GTCGGATCTA GGTGTCGACG ACTACACCAA ACCAGAGGTG GCGCAGTACA TTGAATGTAC 
ACCTTTTCAA ATCCAAGGCG CCTATTACTA TTTCCAGATT GGGTGCGCCG ATGGCGTCAC 
TCAAAAGCTT GCTGTAAATA TTTACTCCGA CAATACGTGC TCAAAGAAAT CAACTGTGGA 
CGGCTTCGAT GATTCTGTCA TTGACGTTTC GGCTTTGAAT GTAAGCAGAT GCAGTTTTTT 
TGTCCTGGCG ACGGATTGGC TTGTTGTGTT GCTTAATGGC AGTCTATTTA TTCCCAACAG 
ATTCCTTTCA AACAATGCCA AACGTGTGTT AACTGGGTAA ACGTGGATGG GGCTGACGAT 
CAATTCTACA TCAAGCGTCA ACAAAATGCT CCTCTTTGTA AGACTGCTTG GACGTACAAG 
AAGCATTGTG GGCGCCAATG TCAATCCGTT GGTCGCAATG CGGAAGTCGA AGGCTGGAAT 
GCTTCAGATA AAATTCTAAT ATCGGTGCTT TCCTCTTTTG CTCTCATTCT GCTTGGATCA 
ATTGCCTTCC GGAGACAGAA GATGCCCAAC AAGGATATAC TCTTGGAACA AGCATTTATA 
AACTCAGCGG GACTTCGGCA ATCACAGATT TTTGTCATTA TCATCATCGT CATGGCAGTT 
ATCGCAGTCC TCATCATGCT GGGTTTGAAG GACGCGACCT GGGCTTTGCT ACTGGTATTG 
AATACTGCTC TGTTTGCTTA CCTTATGAAG CTGACACTGG AAAGCAGTGT CAATACCGGA 
GAAATTATCA TCGGACCAGA TGGCACTATT CTACGCAAAG ATTCCGACGA TTCTTCCATA 
GAGAGTACAA GTAACCCCAA CAATGGTACC TACATGTTGC CAACGTTGAC ATGATCGAAT 
TGTGTACTTA AATGACATTT AGGTTTTGTG CCCTCGACTG ACGCAATACC TCGTGGACCT 
GTCGATCCTT TTGTCCTCGC TCGTTCCCCT CTTGTTTCTG TCATTAAGTT AAACAAGGCG 
TCGTGCAAAG TCTATAGTAG TTGAAAACGG CTAAAGAGTG AAATATTCAA TAGGCATGCT 
TTCCTAAGAC GGAATAATTG GTATTTGATA AATTTTCATC TCGGCTGAAA ATCCCTGCTG 
TTGGTCTTGG CCATAGGGCT CGAATTTGTT CCGCACTCAT GTTTTTTTTA TTGCTGTGCA 
CACAGAGTCA TATAAGACAA GCATCTGATC CTCTCTATAC TATCAATTGA TTGTAAAAAG 
TTTCATGTCT ATTAGAATAC TGCAACTTTG TTTGCAACAT TGTGTGTTTC ATCCGAGCAA 
CATTGCCTAG CGCGAGGAAT TGAATCAATT TTTTTGCTGA CTGTGATTGT CTCGCTTGGT 
TATTAGATTG AACCGCAGCA GTGTTGATCG ATCCAAAGGA AGAGCTTTCC GACTCAGTAT 
CAACCACACT CCCTTTAGCG AAAGCTTCGT TGGTTGTTTC CATACTGTCG CATTCACATC 
AACAGGAAAA CGCCTTGGTG ACGCCGCTCT TGCGGTCAGA TCATCATCAC GAACTGAGTC 
TACAAGCAAA TTCCGAGGCT TCCGGCCACG TCGCCGAAGC CGATATCGAA GGGGAAGAGG 
TTGGAGGTAC CAGCATGAGC AGCACTTACC ATGATCCCCG ATTTATTCGA AATCCAGTTA 
TTCGGGGACT ACTGCTGCGT TTGCTGCGTA TGCAATCAGC GGCCGATTCC TTACCACACC 
TAGTTCAAAT GATCGTGTCG AATGGAAAGA TTACAACTGT ATCATTCGTT GCTCTCTATC 
TCGTGTGTTT AGTCCTTTGG CTACCTTTCT GGCTGCTTGC TTTGCTAGTC ACGGAATGGG 
GCGTCTATGC GCTGTCTGTT GCGGGAGGGT ATTTCATTGG ACGATGTATT ATTCGCATGA 
TTGCTTTTCC TGGGGCTTCC CGAAAAGTCA GTACCGATAT TGAGAAAGAA TTTGCCAAAT 
ACTCAGTCCG TATGTTGCAG TCCGGTGTCC AAAGCTTCGC GGAAGTCGCT TCGATCATGT 
CAGCCAATCC GAACCATCCC CAACGAGTGA GTGTTTTGAA GGGGTACACA CTGCCGTCTC 
TTTGGAGTAG GGCCAAAACC TATCGAAACC GTGTGTTGGG AGTATACTTG GAAGTTCTTT 
TGCACATTTA CCAACAGGCA CCAGAATCAT CTACTGGGGC ACAAAGAGGA TTCACAAAGT 
ATGGCAACAA CGTTTTATCT GGAGATATTG GGAACATTGC CGGACTATCG GTAAGTTTTC 
ACGTTGTCTG CGCTGCAATT GTGTTCGTTA TTCTCAAAAT AGATAAAAAT GCTTCTACTC 
TATCCTGTAG GCCCAAGCCC AAAATGATGG GCTTGGTCTC ATTGAACAAC TCAAAACGGT 
ACTGGCTTTG GTGGACACTT TGGAAGAGCA AGCGCATACG TTCCTTGAAG GTAGAGCAGC 
TGTTGTAACG CCAAATGATC TTCCGGAAGA TGCACGCCGG ACGGCGCAAC ATCTTTTGGC 
CCGGTCTCAG GAGCTTACCA ATTTCGTCTC GTCCTTAAAA CCTCCATCTG ATAGCAGCAA 
TGAAGACATA GAGGATGAAT CAGAAGAAGA CTTAACGGTT GACGCAGTAC GCAGAAAACT 
AGAAAGGCAG CATGGTTCCA CAAGAGAGGC TATTAAAAAA GGAATTGCTT CTGTTATCCC 
CCTGTTGGAC CCCCCACCCC ACAACTCAAT ATTCTCGTTT GATTTACAAC GTGGTTGCAT 
GTTGAGTCGC TATCGAGGTG CTCGCCAGCT TTGGGTGCGT CGTCCTAGCG GCGGCATGTT 
GGATGTTTTG CATTTTCCCG CTCGCGATCG TTGTGCGGAT ACTCAGCGGA ACTCCAAAGC 
ACTTCTTTAC TGCAATCCTA ACGCAGGTTT AGTTGAAGTA GCAGCCGGGA TGAGCCTAGT 
TGGTGGGAAC GTGCCGTCAA ATGAGGGTAA TGAACAAGCA TCCGATGGGA GCTGGGTGGA 
CTTTTACACC TCCGTCGGCA TAGATGTCTA TGTCTTCAAC TATGCAGGAT ATGGACGAAG 
CTTTGGGTCG ACAACATGCC TAAAAGGGAA CAGCGCGATC GATAGCTATA CTCCCGGTAT 
CCTACCCCGA TTGATTCGAA TTATTCGCTC TACATTTTTA ACGTTCACGC CAAATCCAGA 
CACTCTCCGC GATGACGGGT TTGCCGTTGC GGTACACTTG CTCAAGGAAG TGGGTATAAA 
ACAGCTTATA ATCCATGGAG AGAGCATTGG TGGGATGGCT GCATCAAGTA CCGCTCGTCG 
AGTCTCCCAC GAGCCGGAGC TACAGGATAA GCTGGCTCTT CTGATTTGCG ATCGAACGTT 
TTGCAACTTG GAGGCTGTAG CTCAGCGTCT CGTCGGAGGG TGGACAGGAA ATGCGATTCG 
GATGTTAGCA CCTTTCTGGA GTACAGATGT AGCGGGCGAC TTTTTCGCAA CAAACTGCCC 
CAAAATTGTT GCCAATGATG CAGCCGATGC AATTATTTCT AATGAAGCAA GCCTGAAGTC 
TGGAATTTCG CTTTGGAAAG AATTGCATCG CGGAATCGCT TCCACAAAGG GAATTGGTTG 
GATGACGGAA GCACCCTTAC AGTACAGAAT GGCCGATTGG GAGAATGTCT GTGTGAATGA 
TTCGAAGTAC GTTACAGCAC CAGGAGTACT TCGATCTCAA GCACCGACAT GGCCTCACGA 
CAAGCACATA TCCGTCGAGG AGGCTTTTCA TTTTGCGGCA TGCTGTAAAC GGATTGGAAA 
GTACGCTAAG GCTTTCAGGA AAGGCTCGGA GGGTGGCGAT TTGAGTGGTT TGCACCCCGG 
CTCTAGGCGT GCTCTAATGG AAGCATGGCA GTCTCTGGCA TGTCTCGACG GTCTCACTGG 
AGCACCGCTC GGTGTTGCTG TCAAACAAGG GTTCGATACG ACGGTAGCTT GGCTATGTTC 
TTTTCTGATT TTCGGTGCTC AATCAATTGT AGCTGTCGCT GAGCGACGCA CGGAGGGTGA 
CGTTGGGCTT CGGGAGCAGC TAGCAATTGT CCCCTCTGAC TTTGATTCCC GACCAGCCGG 
CTTTGCAGCT GCAGAAGAGG GAGGCATGGT GCATCCGAAA CCACTTCCAG AAGTTATTGA 
ATCCCTTTTG TCATTTCAAG AATCAGGAGA TCCTTCCCTC AGAGACTGTA AGTTGTGACT 
GTCGTTTCGA TTTAGCTACA GGGCTATCCC TTATCTAACC TAAGTGTATT CCTCTCTTCC 
AGTGTCCCAT GAATTTCAGT TTGTTGTTGG CGTTCTTAAG TATTTGCAAG GCCGCCTGTC 
GGCATCCACG AGTATTGAAG CTGCGCAAAA AAGCCGAAAA TTGCAAGTTT TTAAGGAAGG 
TGTTGGCTTC TTGTTGAACC TACATTGTGG ACACAATAAT CCCTTTTCCA AGGAGGAACA 
ACTGCAGCTG AAAGGACTTT TGGATAGGGC CATCGGAGTG AAAGGAGGTG GATTGGTGTA 
GTCTTTGCAT TTACCAGAAA ATACAGTAAG CCATACTTCA CGCTGGCTTT CGGAAACGAG 
TTTGAGATGT ACACCGTTTT TGGCTGGCTT ACAGTTATTA CAAATCGTTC ACAACACGCG 
TTT 

 

Protein sequence

MKTENGRKLN SWYVLFCFVS STMAEYTYYD NEGYQEGYNT SHTITGGDGM EYYSNTSNSA 
TNSSGGDIDY WTNYAIFPKR CIVYKKTDYI MYEMFDQQYC QEENRLGTYI SRVPDYMTGH 
LQQLAEQMSD LGVDDYTKPE VAQYIECTPF QIQGAYYYFQ IGCADGVTQK LAVNIYSDNT 
CSKKSTVDGF DDSVIDVSAL NIPFKQCQTC VNWVNVDGAD DQFYIKRQQN APLCKTAWTY 
KKHCGRQCQS VGRNAEVEGW NASDKILISV LSSFALILLG SIAFRRQKMP NKDILLEQAF 
INSAGLRQSQ IFVIIIIVMA VIAVLIMLGL KDATWALLLV LNTALFAYLM KLTLESSVNT 
GEIIIGPDGT ILRKDSDDSS IESTSFVPST DAIPRGPVDP FVLARSPLVS VIKLNKASCK 
ENALVTPLLR SDHHHELSLQ ANSEASGHVA EADIEGEEVG GTSMSSTYHD PRFIRNPVIR 
GLLLRLLRMQ SAADSLPHLV QMIVSNGKIT TVSFVALYLV CLVLWLPFWL LALLVTEWGV 
YALSVAGGYF IGRCIIRMIA FPGASRKVST DIEKEFAKYS VRMLQSGVQS FAEVASIMSA 
NPNHPQRVSV LKGYTLPSLW SRAKTYRNRV LGVYLEVLLH IYQQAPESST GAQRGFTKYG 
NNVLSGDIGN IAGLSAQAQN DGLGLIEQLK TVLALVDTLE EQAHTFLEGR AAVVTPNDLP 
EDARRTAQHL LARSQELTNF VSSLKPPSDS SNEDIEDESE EDLTVDAVRR KLERQHGSTR 
EAIKKGIASV IPLLDPPPHN SIFSFDLQRG CMLSRYRGAR QLWVRRPSGG MLDVLHFPAR 
DRCADTQRNS KALLYCNPNA GLVEVAAGMS LVGGNVPSNE GNEQASDGSW VDFYTSVGID 
VYVFNYAGYG RSFGSTTCLK GNSAIDSYTP GILPRLIRII RSTFLTFTPN PDTLRDDGFA 
VAVHLLKEVG IKQLIIHGES IGGMAASSTA RRVSHEPELQ DKLALLICDR TFCNLEAVAQ 
RLVGGWTGNA IRMLAPFWST DVAGDFFATN CPKIVANDAA DAIISNEASL KSGISLWKEL 
HRGIASTKGI GWMTEAPLQY RMADWENVCV NDSKYVTAPG VLRSQAPTWP HDKHISVEEA 
FHFAACCKRI GKYAKAFRKG SEGGDLSGLH PGSRRALMEA WQSLACLDGL TGAPLGVAVK 
QGFDTTVAWL CSFLIFGAQS IVAVAERRTE GDVGLREQLA IVPSDFDSRP AGFAAAEEGG 
MVHPKPLPEV IESLLSFQES GDPSLRDLSH EFQFVVGVLK YLQGRLSAST SIEAAQKSRK 
LQVFKEGVGF LLNLHCGHNN PFSKEEQLQL KGLLDRAIGV KGGGLV