| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42851 |
|---|
| Symbol | |
|---|
| ID | 7196503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1313773 |
|---|
| End bp | 1315085 |
|---|
| Gene Length | 1313 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176763 |
|---|
| Protein GI | 219110022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GACTATAAAG GCTCCCTTCG GCATTGACTG CAAGAAAGAA AAGCGACAGA TCCTTTTTGA
TTGGAAAGGG CGTGCATCAA TTCAATTGTG AACAAATTTC TCGTCAAGCA TGAAGAATCT
CGTCAGCAAA AGCGAGTCAC TTGACAAAAC TTCCAATGTT CTGGTCGACT ACAAATCGGT
TGATTATAGG GGATTCGTAT TCGTTGTGCA CCACGCACAT GGTATGATGC TTTTGCGTTG
TACCAGAAAG AAGAACAAGC CACACCACTG GCAACTGCCT GGCGGACATA TCGATAAAAC
TGAATTTGTT GAAGCTGGTA AGTCGCTTCG TAGGTCTGCC TCGCCTTTCT TATTATGTAG
CTTGTCGGTG AGGGAGATCT AACATATCGC CTTGCTCTAA TGGTAGCGAG AGCAAACTTT
GTTCACAATA CTCAGTTACT GGAGGCTGGG AAACGAGGGG CAGCAAGGGA GCTATTCGAA
GAAACAGGGA TTGATGTCAG ATCCCAACTG CACCGGATGG AGCCTGCCAC ACTTCGAGAG
CCCAAAGACG GCGAATCTGA ACTCGCCAAT GAGTATAAAC ATCGACTCTT TTACATCCTG
AATGTTGCGA ATGACGACTT TCTGTCACAC GGCGAAACCC CTATGGGCAC ATTAGGAGAG
ACCCTCAAAG TAAGTACAGT ATATTTGGCG ATGATATATT TTGCTTGTTT ATCGGTCCTC
AACTTGTTTG TGTGAGAAGC TCCGGCTGTC ATTCGAGCAC TCTGGTTTCA TATTTCAGCC
TGAACCAGAG GTCGCTGCGG ATATGCTTAA ACTTCATAGC GGAGGCAAAG TATCGGCAGC
ACTTCTAATG GCTATGGGCC GGTCAATAGT CCACGAAAAG TCTACTGATC GAAACAAAAG
TGCTGCCACT ACCCTATCAC AACACCACGA CGATTTGTCA CTGTCCATTC GGTCTGGTAG
GCGTTCAAAA CGAGAGAAGG ACGAAAGGAG CGCTAACATT TCCGTTCCCG TCGACGTAGT
TCCGAAGCCA GTGAAGAAGA GCCTCTTTTG TTGCTTCCGT TGATCCTCAA CTTTCCTTAA
ATTTTAGTCA TACTCTTTTT CAATATGGAC TACGCTTTCT GTTCGCGTTA CCACAATGCA
AATTTCTCAA ACTGTTGGAT ACGAATGCTT CTGCGGAATT ACTGAATGAT TTGCACAGGT
CATCATTGAA ATATGACGAA GATCCTTCGC CTGGACTTTT CGAATCGCCT TCAATCCGTG
TACGGACCGA CGTTGCCCGA AAGAAGCTTC AGAAGCAATC GATGCAATAC TAG
|
|---|
| Protein sequence | MKNLVSKSES LDKTSNVLVD YKSVDYRGFV FVVHHAHGMM LLRCTRKKNK PHHWQLPGGH
IDKTEFVEAA RANFVHNTQL LEAGKRGAAR ELFEETGIDV RSQLHRMEPA TLREPKDGES
ELANEYKHRL FYILNVANDD FLSHGETPMG TLGETLKPEP EVAADMLKLH SGGKVSAALL
MAMGRSIVHE KSTDRNKSAA TTLSQHHDDL SLHTLFQYGL RFLFALPQCK FLKLLDTNAS
AELLNDLHRS SLKYDEDPSP GLFESPSIRV RTDVARKKLQ KQSMQY
|
|---|
| |