Gene PHATRDRAFT_42825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42825 
Symbol 
ID7196485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1248428 
End bp1249243 
Gene Length816 bp 
Protein Length271 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177248 
Protein GI219110993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.66909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTC CGAGGAAGGT CACTCCCGCT GTTCCGGCTC CTGCTGCAGC GACGGACTCA 
CCGGCTGATG CCACGTCCGC ATCCGAAGAT GAGGAGTTCG GAGGATTCGA CTCCTCCGAC
GGTGAGGAGC CTTTGGGCAC CGCACCGCCA TTGCCGGCAT CTTTGGATGA TGAAGGTGAT
GGCAAAAAGA CTGCAAAGCC TTTGGCTCTC AGCAAGAATA TGTCTGACAA AGTCAGCGTG
ATCAAGAAAA GCGTCATCAA CCCAGAGCCT CACTTGTCTA AAGACAGTGA CGGTCTCGAC
CCCATTCCTT GGCAAGACCG TGTCGAACAA AAGGCCTTGA TGGTTGTCCT CCGTGATGTC
ATCTGTTTTC CATTGTCAGT TGCAGCTGCA ATATTAAACA ATGGCATTAA ACCATCTGAT
GATTTCCGTC TTCTCACAAA GGAGGACATC AATGATCTCT GCATGCGGCT CAAAGTGGGC
TCCATGCATA CCAAGCAAAT ACTTGTCTTC GCAAAATGGA TGCATCACAC ACCCAACTCA
GTTGATGTTG CCAAAGAGTT CACAGCTTCC GTGCTACGCT TTGAGATGAT GACTAGAGCT
GCGGCATTGT ATGATAATGT GACTACAACG GCTGCAAAGG CCGAAAAATC GGCTACTAGC
CTCTTGCCTG AACCGTTTGA CGGTTTGCAG AAAAAGTGGC TCACTTTTTG TTATGGTTTT
GAAGCGTGGG CAGGCGCAAG TGGGTCCACT TTTACGTGCA TCACGCATCA TTTGGATTGG
TATTTGAAAG CCAACCCAAC CTATTACGTA GTATAA
 
Protein sequence
MRRPRKVTPA VPAPAAATDS PADATSASED EEFGGFDSSD GEEPLGTAPP LPASLDDEGD 
GKKTAKPLAL SKNMSDKVSV IKKSVINPEP HLSKDSDGLD PIPWQDRVEQ KALMVVLRDV
ICFPLSVAAA ILNNGIKPSD DFRLLTKEDI NDLCMRLKVG SMHTKQILVF AKWMHHTPNS
VDVAKEFTAS VLRFEMMTRA AALYDNVTTT AAKAEKSATS LLPEPFDGLQ KKWLTFCYGF
EAWAGASGST FTCITHHLDW YLKANPTYYV V