Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42787 |
Symbol | |
ID | 7196154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1107576 |
End bp | 1108528 |
Gene Length | 953 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177221 |
Protein GI | 219110939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0920905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCACAGCTC AAAAATTTAG AGTATGAGCT TACAGGCTTT AAATTCGCCA CCGCTTATCG CTGTGGCTGG AGCAGCGGTG CTGTCCGCAA TTCCATCGCT TCAGGCGGTT GGCTTTTCTC TTGGATCTTT GCAGCTGCTC AACGCTGCCG CGTTCGCTAC GAACGTCGCA GCTGTTTCTG TGCCAGGAAG GATCGATGGT CAGCAAGATG CCGAAATGCG TAAAGAAGTA TTGAATCCCG CTGAACCTGG ATCCGGAAAT ACCTCTTCGA AAGACAATGA GAGTTGTTCA ACCTTTTCAG ATGTTTACTC GGCGTCGCGG GGTCGCACTC TCGTTTCCCC AGCTGGGTGG GCGTTCGCAA TCTGGGGCCC AATCTACCTA GGCGAAGCGG CGTTCTGTCT GGGTCAGTTT TCTGTGCAGC CATTGCAGAC TGTGCTACCA CAAATTTCGG CTCCGTTTAT CGCTGCCAAT CTCTGTCAGA GTCTGTGGTG TGCTTCTTTC AGGCCTTCGT ACAACAAGGG CTGGGCCAAA TACGTCAGTG CGGCTATGTT GGGAGGGACA GCCGTCGCTC TTTCCCAAGT TCATGCTGCC GTGCCTCCCG GACTTGCTGG CTATTTTGTT CCATTGACAA TGCACTTCGG CTGGGCAACC GCTGCAACAT TGGTTAACCT GAACGGTTGC GTAGCAATGT CTGACGTTTC CGATACTTTC GTGATCGCGA CGGGTCATGC GTCAGCCCTG GCAGCAACAG CGTTGGGTGT GGGTGTCACA TTGACGCAAG GATCACCTGT CTACGGTTTG ACAATCGCCT GGGCGTTAGC GGCTTGTGCG AACGGAATGA AACAGCGTGA GACAAAGACC CCTCTGCAAA AGGGTATGAT GGTTCAGCGG ACTTTGTGCA TGGCAGGATC TACCCTATGT GCTGCTGTTG CCACTGGCTC CTTCTTTTTC TAG
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Protein sequence | MSLQALNSPP LIAVAGAAVL SAIPSLQAVG FSLGSLQLLN AAAFATNVAA VSVPGRIDGQ QDAEMRKEVL NPAEPGSGNT SSKDNESCST FSDVYSASRG RTLVSPAGWA FAIWGPIYLG EAAFCLGQFS VQPLQTVLPQ ISAPFIAANL CQSLWCASFR PSYNKGWAKY VSAAMLGGTA VALSQVHAAV PPGLAGYFVP LTMHFGWATA ATLVNLNGCV AMSDVSDTFV IATGHASALA ATALGVGVTL TQGSPVYGLT IAWALAACAN GMKQRETKTP LQKGMMVQRT LCMAGSTLCA AVATGSFFF
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