| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_4266 |
|---|
| Symbol | |
|---|
| ID | 7197672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 525232 |
|---|
| End bp | 526011 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178529 |
|---|
| Protein GI | 219115467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0181286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCAATTTAA CTGGAAAGGT TGTCGTCGTC ACCGGTGCGA ACTCGGGTCT TGGAAAGGAA
GTTGCGACTT ACTCTGCCGC CAAGGGAGCT AAGCTTTACA TGCTCTGCAG AAGTAAAGAC
CGCGCCGAGG CAGCTCGGGA CGAAATTATG GAAAAGACCG GAAATAAAGA TATTGAAATA
GTACTGGTGG ATGTCGCGGA ACTTTCCAAA GTTCGCGACG CGGCCAACAC CCTGAAATCG
AAGGAGCCAA AAATCCATGC AATCGTATGT AACGCCGGCG TTTTGTTGAA CGACCGTCGC
GAAAGCAGCG AAGGGAACGA ATTGACTTTG GCGTCGCATC TTATTGGCGG TTCATACTTG
CTCAGCAAAC TTTTGATGGA TCAAGTGAAG GCTGCCGACG GACAAGGTCG AATCATTATG
GTGACTTCAG GAGGCATGTA CAATTACAAA TTTCCAGCAT GGAATGTGGC GGCAAATACG
GGTGATCAGA AGGAGAAATA CAATGGCGTT AATTTATATG CGTATGCCAA GCGAGGACAA
GTTCTTCTAG CCGAGCGCTG GAGTAAGGAA TATCCCGATG TGACTTTCTG CACTGTGCAT
CCTGGCTGGG CAGACACTCC TGCTGTTGAA GAAGCGTTTG GCGACTCGAA AAAGTATCTA
AAACCGTTAC GAGAACCATG GCAGGGAGCC GAAGGTGTCA CTTGGTTAGT TGGAACGGAC
CGATCCAATT TAGAGAGTGG AGACCTGTAC CTTGACCGTA AGTCACAGCC AAAACACTTA
|
|---|
| Protein sequence | VNLTGKVVVV TGANSGLGKE VATYSAAKGA KLYMLCRSKD RAEAARDEIM EKTGNKDIEI
VLVDVAELSK VRDAANTLKS KEPKIHAIVC NAGVLLNDRR ESSEGNELTL ASHLIGGSYL
LSKLLMDQVK AADGQGRIIM VTSGGMYNYK FPAWNVAANT GDQKEKYNGV NLYAYAKRGQ
VLLAERWSKE YPDVTFCTVH PGWADTPAVE EAFGDSKKYL KPLREPWQGA EGVTWLVGTD
RSNLESGDLY LDRKSQPKHL
|
|---|
| |