Gene PHATRDRAFT_42656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42656 
Symbol 
ID7196004 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp715615 
End bp716907 
Gene Length1293 bp 
Protein Length303 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177143 
Protein GI219110783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.657836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGAAAACCA ATATTTCGAA TTCCCCAAAG GGAAGGCATC CATTTTTAAA GCCAGAGGCT 
TTAATGTGGG AAAGCTCAAG GGAGAGCAGC TCATGTCCCG TCGAGGTAGC ATCCTTCAGC
CCCATGAGCA CGATGTCTTG TTGGGACGAG GCGGCAAGAA CAATCAGGCT CTGGGGAATG
AAAAGCTACG AGAGATGGCT CGGGTGGAGG CGGAAAACTA CCGGAGATCG ACGAAGAAAG
GGAAGTCAAG CATTTCTCGA AAACTGGTAC GGCAGATGAG AGAACTTGAT CCACCAGCGA
GGTACGAGTG TCGCGGCATT CAGATTTCCT GTTCTGATAC ATTTCTCAAA ACTAACCAAA
TGAATGATGC ATTAAATATA ATTGCAATGT TTAGGTTTAT GAAGAGAAAT TCTGACAATT
CAGAGTGGGA AGATGTAGGC GACGAGTTTG CGAGGGAGAA AGCTAGCCAG GTATTGCGGG
ACGCTGTTGC TGGGTTGCCT GAGATAACGG GAAGTGGCGA TATTGGCTAC GACGAAGAAC
GAGATACGCA GCCTCGTCTG GTGACAGCAT CGCGTTCGAG AGACTCTGCC TCTAGAGCAT
ACGCTGAAAT GCAGCCTACT CCTACACTAC AGTGTATAGC GTCGTCTTTG CCACCCCCTA
CTCCTCTTGC AGTGGGTTCA CGCAAGCGGA GCCGCTACTC CCAACACTCG GAACAACAAC
CGACAGCATA TCCGCGTCAA GGGTATGCTC CCCACACCCC CACTGTATAC AGTCCTCCCC
AATATCCTTA TTCATACGAC CACCCAGGCA CTTATACGCC AACACACTAT TCTGGCTTTC
CAGCGCGTCC GCCGCTTCCG TCTTTTCTTC ACGAACGCAT CAACCCACGC GTGGCTACCC
GGCCAGCACG GGTTCAAAAC CGAGACACTT CTACGGCATC AAGCCTTTTA GGGGAGATTC
AAGAGCACGC TACGGAGTTC GATTTGTTCA ATGGGGAGTT ATTGGCGAGC GATACAGAAG
AGGAAGTAAA GGAATCACGA GCGCCATCTG GCTATCGCCG TGATTCCTAC GGCCACCCAG
CGCCACCGTG GCCGTAGAAA AACTTTTTCA CCTGTAAGTT TGCATCCGCT TTTTCACCCG
AGACTGGGAC GATGCTAGTG TTGGCAGCGG GGAATAAAAC TAGCGAATTT CAGCGTCTTT
TGTATTGACT GTGAATGTAA ATAAGTGTAT ACCGAACGAC GAATAGCTTT GGTCAGTCTC
TTGACTTTGT AGCTATTGTC TCGACTGCAA AAA
 
Protein sequence
MSRRGSILQP HEHDVLLGRG GKNNQALGNE KLREMARVEA ENYRRSTKKG KSSISRKLVR 
QMRELDPPAR FMKRNSDNSE WEDVGDEFAR EKASQVLRDA VAGLPEITGS GDIGYDEERD
TQPRLVTASR SRDSASRAYA EMQPTPTLQC IASSLPPPTP LAVGSRKRSR YSQHSEQQPT
AYPRQGYAPH TPTVYSPPQY PYSYDHPGTY TPTHYSGFPA RPPLPSFLHE RINPRVATRP
ARVQNRDTST ASSLLGEIQE HATEFDLFNG ELLASDTEEE VKESRAPSGY RRDSYGHPAP
PWP