| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42656 |
|---|
| Symbol | |
|---|
| ID | 7196004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 715615 |
|---|
| End bp | 716907 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177143 |
|---|
| Protein GI | 219110783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.657836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGAAAACCA ATATTTCGAA TTCCCCAAAG GGAAGGCATC CATTTTTAAA GCCAGAGGCT
TTAATGTGGG AAAGCTCAAG GGAGAGCAGC TCATGTCCCG TCGAGGTAGC ATCCTTCAGC
CCCATGAGCA CGATGTCTTG TTGGGACGAG GCGGCAAGAA CAATCAGGCT CTGGGGAATG
AAAAGCTACG AGAGATGGCT CGGGTGGAGG CGGAAAACTA CCGGAGATCG ACGAAGAAAG
GGAAGTCAAG CATTTCTCGA AAACTGGTAC GGCAGATGAG AGAACTTGAT CCACCAGCGA
GGTACGAGTG TCGCGGCATT CAGATTTCCT GTTCTGATAC ATTTCTCAAA ACTAACCAAA
TGAATGATGC ATTAAATATA ATTGCAATGT TTAGGTTTAT GAAGAGAAAT TCTGACAATT
CAGAGTGGGA AGATGTAGGC GACGAGTTTG CGAGGGAGAA AGCTAGCCAG GTATTGCGGG
ACGCTGTTGC TGGGTTGCCT GAGATAACGG GAAGTGGCGA TATTGGCTAC GACGAAGAAC
GAGATACGCA GCCTCGTCTG GTGACAGCAT CGCGTTCGAG AGACTCTGCC TCTAGAGCAT
ACGCTGAAAT GCAGCCTACT CCTACACTAC AGTGTATAGC GTCGTCTTTG CCACCCCCTA
CTCCTCTTGC AGTGGGTTCA CGCAAGCGGA GCCGCTACTC CCAACACTCG GAACAACAAC
CGACAGCATA TCCGCGTCAA GGGTATGCTC CCCACACCCC CACTGTATAC AGTCCTCCCC
AATATCCTTA TTCATACGAC CACCCAGGCA CTTATACGCC AACACACTAT TCTGGCTTTC
CAGCGCGTCC GCCGCTTCCG TCTTTTCTTC ACGAACGCAT CAACCCACGC GTGGCTACCC
GGCCAGCACG GGTTCAAAAC CGAGACACTT CTACGGCATC AAGCCTTTTA GGGGAGATTC
AAGAGCACGC TACGGAGTTC GATTTGTTCA ATGGGGAGTT ATTGGCGAGC GATACAGAAG
AGGAAGTAAA GGAATCACGA GCGCCATCTG GCTATCGCCG TGATTCCTAC GGCCACCCAG
CGCCACCGTG GCCGTAGAAA AACTTTTTCA CCTGTAAGTT TGCATCCGCT TTTTCACCCG
AGACTGGGAC GATGCTAGTG TTGGCAGCGG GGAATAAAAC TAGCGAATTT CAGCGTCTTT
TGTATTGACT GTGAATGTAA ATAAGTGTAT ACCGAACGAC GAATAGCTTT GGTCAGTCTC
TTGACTTTGT AGCTATTGTC TCGACTGCAA AAA
|
|---|
| Protein sequence | MSRRGSILQP HEHDVLLGRG GKNNQALGNE KLREMARVEA ENYRRSTKKG KSSISRKLVR
QMRELDPPAR FMKRNSDNSE WEDVGDEFAR EKASQVLRDA VAGLPEITGS GDIGYDEERD
TQPRLVTASR SRDSASRAYA EMQPTPTLQC IASSLPPPTP LAVGSRKRSR YSQHSEQQPT
AYPRQGYAPH TPTVYSPPQY PYSYDHPGTY TPTHYSGFPA RPPLPSFLHE RINPRVATRP
ARVQNRDTST ASSLLGEIQE HATEFDLFNG ELLASDTEEE VKESRAPSGY RRDSYGHPAP
PWP
|
|---|
| |