Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42654 |
Symbol | |
ID | 7196317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 708940 |
End bp | 709583 |
Gene Length | 644 bp |
Protein Length | 168 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177141 |
Protein GI | 219110779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAGACGCTT CAACAAGATG CTATACACCG CGGGAATACG GAGCATTGTG ACTTTATCGC CGAGTCGATT GCTAGTTCCT GTAGCAGGTG CGACGCAAGT GCGATGCTTC AGCGATCCCG ATGGCCCGAA ACAACGCGTT GTAAAAGCGA AAAAGAAGAA AAAGGGCACT GGCCAACAAA CGGAATCGGC CCGCAGTCGA GAGTTGGACC TTGTGCTTGC AGCCCTTGAT GCACCTTCTA GTAAAGAGCC TCCTATAGAT GATGCAGAAA AAGCGCGGCG CTACCAGATT GGGCGAAACT ATGTGATAGG AAGCTTTGAG CGGCATAACG AGATTGACCA CGATTTGACG TGCAAAATTC ACATTAAGCA GCACGCCCTC AATATGCTGC CTAAGGGCAC CAAGCTTCGA GAGGAAGCAT TGAAAACTGA TACTAAGAGC CCTCCTCTGT GGCGAAATTT GCCAGTGTGG ACCCCGCCGA TTCCAGGTTT CGATCCTTCG CAATTTGTGG ATCGTGAAGA GTAAGCGATT CTCTTCGATT TCGGTTCTTC CAATCCTTAT GCTTTCACAA AATATAAGAG TAAAGCCAAG TCTTCACAGT TCTCTGCACT AGATACATTT TAAACATAGG ATAAGAGCTA GCTG
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Protein sequence | MLYTAGIRSI VTLSPSRLLV PVAGATQVRC FSDPDGPKQR VVKAKKKKKG TGQQTESARS RELDLVLAAL DAPSSKEPPI DDAEKARRYQ IGRNYVIGSF ERHNEIDHDL TCKIHIKQHA LNMLPKGTKL REEALKTDTK SPPLWRNLPV WTPPIPGFDP SQFVDREE
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