Gene PHATRDRAFT_42654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42654 
Symbol 
ID7196317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp708940 
End bp709583 
Gene Length644 bp 
Protein Length168 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177141 
Protein GI219110779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAGACGCTT CAACAAGATG CTATACACCG CGGGAATACG GAGCATTGTG ACTTTATCGC 
CGAGTCGATT GCTAGTTCCT GTAGCAGGTG CGACGCAAGT GCGATGCTTC AGCGATCCCG
ATGGCCCGAA ACAACGCGTT GTAAAAGCGA AAAAGAAGAA AAAGGGCACT GGCCAACAAA
CGGAATCGGC CCGCAGTCGA GAGTTGGACC TTGTGCTTGC AGCCCTTGAT GCACCTTCTA
GTAAAGAGCC TCCTATAGAT GATGCAGAAA AAGCGCGGCG CTACCAGATT GGGCGAAACT
ATGTGATAGG AAGCTTTGAG CGGCATAACG AGATTGACCA CGATTTGACG TGCAAAATTC
ACATTAAGCA GCACGCCCTC AATATGCTGC CTAAGGGCAC CAAGCTTCGA GAGGAAGCAT
TGAAAACTGA TACTAAGAGC CCTCCTCTGT GGCGAAATTT GCCAGTGTGG ACCCCGCCGA
TTCCAGGTTT CGATCCTTCG CAATTTGTGG ATCGTGAAGA GTAAGCGATT CTCTTCGATT
TCGGTTCTTC CAATCCTTAT GCTTTCACAA AATATAAGAG TAAAGCCAAG TCTTCACAGT
TCTCTGCACT AGATACATTT TAAACATAGG ATAAGAGCTA GCTG
 
Protein sequence
MLYTAGIRSI VTLSPSRLLV PVAGATQVRC FSDPDGPKQR VVKAKKKKKG TGQQTESARS 
RELDLVLAAL DAPSSKEPPI DDAEKARRYQ IGRNYVIGSF ERHNEIDHDL TCKIHIKQHA
LNMLPKGTKL REEALKTDTK SPPLWRNLPV WTPPIPGFDP SQFVDREE