| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42584 |
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| Symbol | CDC6 |
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| ID | 7196275 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 496780 |
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| End bp | 500793 |
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| Gene Length | 4014 bp |
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| Protein Length | 1107 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177098 |
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| Protein GI | 219110693 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.277806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGA CTCTTTCATC CTCGACCGCG ACGGCTATTC CCGATCTGCA GACATCAATT
GAAGCCAGAG AGGACCTTGG AGACTTGTTG TTTCATGCTA AAATCAAAAC GAGCGATGGA
ATGGTCCTTT GGCCGTGTAT GAAGTTTGCC AGCGGGTGCG ACGAAATTGT TCAGTGGCTG
GATGGAACGG AGCTGCTTTC GAAACGTCGT CAAAGACAGT GTACCGTTGC AATTCTTAAA
CAAAAATTGA AAGAACCTGA GTCTATATCG AGCACAACGC CCGTGTTGTA TCTTTTGGGG
GAGAAATTGC CGCAGGGGAC AAGCCGTATT CTCTTGCCCG AACGATACGA AGTCGATCCG
ATTTTGATGC ACAATCTGGC TTTGGACTTT ACAGACGCAG ACCTTGACTA CGTCCAGGCG
TTAGATGAGG TTCTCAAAGT CTTGGAAGGA AACTTAAGCA ACAGCGCTGC CTCGAAAATG
ACATGGCGTT CAAGCAGCAA GAAAGAATTG GCTCCGTTGA CTGGCTTGAG CAGCACGATT
GCGGAACCTG CGACCATCCC TGACGGAGTG AGTGCCAACG GCCTTCCGTT TTCTACAACT
TCCCGGAGAT CACACCGAGA GAGTCAAACG CAGACACACG TATCGCCTGA ACGAAGCGTC
CTAGAAAGTG TTGGATCGAA CCTCTCAGAC CTTAAAAACC AGCCCACTCT ACGCTTGGCC
AGCACACCAA CAGCAGAATC TGATTCCGAC ATCCAATCTT CCGGGACGAA AAAATCAAAG
AATGCTCGTA TTAGTATGGA GCCTGCCTTG GCAGAGAACT CTTCGCAGAA ACCCAATGAC
GTGACACCGA AGTCAGCTTC GTCTGAGACA CGAACTCGGA CGAGTACGCG GTCTAGTCAA
GGATCCGCTT TGAAAGCCTC GACAGCCTCC CTGGTGGATT TCTCGGCACC AAGTACTTCC
CTCACCTTGA AAACATCCAG CGTGCAAAAA TCCAAAGTTT CGACCGCGAA AAAATCGAAC
CGAAAAAAGC CACTGCTTGA CGACACTAGT TTGGAACCGA TTCCGACATT TCACAGGGTT
CGCAAGCTCC TTATAAAATG TGGCTTTCTC TTTCGGCAGA ATACTTATTG CCGCCCTGGT
ATGGATCCGA GACGGAACCC ATTGGCCAGG AAAGGTGAGG ACTATTTTGA CAACGAACAC
GATTTCCGGA AGCATGTTTG TGCCTACGGA TTAAATTGCA GCTCTTTAAA ACTGACGAAA
GACGAAGAAA CGCTCGTTAC GCAATGGGTT CGCTATGCAA TCGTGGACTT TGCTGCAGAT
GCCACATGCA TCCCACAGCA CGAGCTGTTA TCGGTGTCCC GAGCTGAAAA GTTGCTTCTG
GATGTGGGCG TACTGGATGT CAAATACATC AATGGTATTG ACGACGCGTA TGTATACCCG
GGGACAAGTA AAGATTCCTA CACGTTCGGA ATGAATGCTT TTATAAAGGG TGGAAACAAT
ACGGAGATGT TTATGAATCT GGCGCGCTTT GGTATTCCTG ATGGATGTGA TTTCAGCAAA
GTATCCAGAG CCGACTATCT AAGTCTGCAA CTTCATTTGA CAGAACCTGG AACCATCGAT
ACCTTGTAAG TTCTATCGCT TCAAGTATAG GCTGTTCTTG TGAAATCTCA CGTAACTATT
TTTTCATCAG TGGGACGTTT GAGGACCCTT TCCCCAGCGA CACTGTGGTG CCGAGAACAC
GAACCCGCCG AATGTCAACT ACTACCCCTG CAAAGGTTCC CCAGGAGTAT CAGAAAGGAA
AACGAGCAAT CAGCAACTAC AGTCCTACCA ATATCTCAAC TGTGACTAAC GATTCTGTGT
GTGACAACAG CAGCGTTGTC TCCGATAGGA ATGAGAAAAA GCGCAAGGCA AAGGCTTCTT
CTAGTAAGCC CATGAAGTCG CCTCGAACTG TTTCGACTGT TGACGCGGAA AAAGATCGTA
CCGGTGGCGA TCGGTCACTT TCTGCCCCTG AAACATATGC TGCTAAGTGG GCTCCTATGT
TCGAAGCGTT AGAATTGCCC AATATTGAGA TAGAATTACC GTGTGAAGGA TTAACGAATG
AGCAAAAGCT CACGGAATGC CTGGAGCGTC TCAATGCCTC GTCGGAAGCA ATCGGTTTCA
GTGTTCCGAG GGATGGGGCT TTCGCCAAAA ATTTAGGCTC GATTTACGAC TTTATTATGG
AAAACGTCTC AGATGGGACC ATGGGTTCGA ACGGAAACTC TGCACTCTAT GTATGTGGGG
TGCCAGGAAT TGGCAAGACT ACAGGTGTGA AGTGGTGCTG CGATAAGTCG TTAGAGTTAA
TTCAACGTGA GAAAAGCGAT AGGTTTCGCA CGCCCCTCTT CTGTGTCATG AGCGCTGCTT
CATTGAATTC GGTCAAGAAA TTTGAGGAAA CGCTTTTCTC GTCAATGGCA AGCGCCATTT
CATCAGTACA TGCTACAAAG GAGGGAATTT TGCGAAAACT TCAACGTGGG AAAGAAAAAG
CTGTACTCTT TTTGGTCTTA GATGAAATCG ACCATCTGGT TTTGGTGAAG CAGGGTTCAA
GCAAGAAACG AACGGGTGGA GAGAAAATTT TGCAGTGGCT TCTTGATTGG GCCGCTGACC
CAAAAATCCC CTTTGCTCTG ATAGGCATTT TCAATTCAAT CGGAAATGAT AGATTTGGTC
GTCTCCATGA AATTGGAAAG GTAAATTTCT TGTTTTGAAT TCTGCCGGTC CCAGTATCCT
TTGTTCAACT TCCTAACTTA GCGAAAATAT GCTTTCTATA CAGTTCAGGA ATACCGTTAC
GTTCAGTTCT TACGATCACA ACGAAATTGT TTCCATACTC AAATCTCGAG TTGGGAACAG
GATCGTGGCC CCGAACGCGT TGACTTTTAT TGCGAAGAAA GTTCAGCAGA GTAGTGGTGA
TGCCCGAAAG GCGCTTGAAG ACATGTCTCT TGCCATAAAA TTCTGCTTGG ATTCTCTTTC
AGACAGTGAA AAGACCAGCA GAAATAACGC AATTTTGGTG AATATGCAAC ACGCAGTTAA
GGTTTTTAGT GTGGTGAGCA AGGACTTTCA GGAGAGAATA TTGACCCTTC CCTACTTGTC
AAAGGTTATT CTGTGCGTAG TCGTGACATT GGCCCAAGCC AAGGTTTCAA CAACGACCGT
TGGGATCCTA AAACGTGCAG TTACTGACTG CGTCATGCAG ACTAACGAAG ATGAACTTGT
CAGCTTGGAG AACTTTCAAT TCATGCTGGC GGACCTCGTT GACAAAGGTT TGCTTTGTTT
TGAAGGGAAG GGCAGCGAGG ATGACTTGTG TCAGCAACAG CATATGCCTG TTCGTTTGGG
TACTCAACTT GATGACGTCG AACAAGTCCT GGAGAAGGAC CTTTCCCAAC AGCAGTTCTT
TGGCAAGTTA CGTGCACTTG CAAGGGACAG GGCCACAGAG TTTCGCCGAT AGGGAAGCAA
GACTTAGCTT AATATGAACA AGCAGTGTTG GATTTTTGCA GGTTCTATTC TTGCTTCATA
GTCTGCATTG CCTGCGCAAT TTGTAGCCTC AAACAAAGAC ATTCCTTGTA GCTTAGGTCT
ACGCCAGGAA ACGCCAGCAG CAAACGATGA CCCTTGCCTC TTCGCTTTAC GCGGAAAAGG
AGTTCACTGC ATACTCGGTA CGCCAAAATT CTCTCAACTA CTACGCAGTC TATCACTTGA
TCCTTAGGAA TGAATGTTGC TTTCCCAATC AATTTCGAAT TTTCGTTAGT GTGTGTTGTC
TGCATCTGTA CCCCTAGTGG ATAAACATAC ACGGCAACCG CTGTCTTCTT TGAAATAGAA
CTTATCGTCC ACGCAAGGGT CGCCACCAGC GCTAAGATAG CTCCAGCGGT AAATATATAT
GGGTTATCAA AAGCGAGCGA AGTGGCAAGG AAAGCAACGG TCGCACCTAG GCAACCCAAT
CTCGAGCTCG TAGAGAAAGG CTCCACCATA CTGCTCCTGG ACTGTACGAC GAAG
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| Protein sequence | MAKTLSSSTA TAIPDLQTSI EAREDLGDLL FHAKIKTSDG MVLWPCMKFA SGCDEIVQWL
DGTELLSKRR QRQCTVAILK QKLKEPESIS STTPVLYLLG EKLPQGTSRI LLPERYEVDP
ILMHNLALDF TDADLDYVQA LDEVLKVLEG NLSNSAASKM TWRSSSKKEL APLTGLSSTI
AEPATIPDGV SANGLPFSTT SRRSHRESQT QTHVSPERSV LESVGSNLSD LKNQPTLRLA
STPTAESDSD IQSSGTKKSK NARISMEPAL AENSSQKPND VTPKSASSET RTRTSTRSSQ
GSALKASTAS LVDFSAPSTS LTLKTSSVQK SKVSTAKKSN RKKPLLDDTS LEPIPTFHRV
RKLLIKCGFL FRQNTYCRPG MDPRRNPLAR KGEDYFDNEH DFRKHVCAYG LNCSSLKLTK
DEETLVTQWV RYAIVDFAAD ATCIPQHELL SVSRAEKLLL DVGVLDVKYI NGIDDAYVYP
GTSKDSYTFG MNAFIKGGNN TEMFMNLARF GIPDGCDFSK VSRADYLSLQ LHLTEPGTID
TFGTFEDPFP SDTVVPRTRT RRMSTTTPAK VPQEYQKGKR AISNYSPTNI STVTNDSVCD
NSSVVSDRNE KKRKAKASSS KPMKSPRTVS TVDAEKDRTG GDRSLSAPET YAAKWAPMFE
ALELPNIEIE LPCEGLTNEQ KLTECLERLN ASSEAIGFSV PRDGAFAKNL GSIYDFIMEN
VSDGTMGSNG NSALYVCGVP GIGKTTGVKW CCDKSLELIQ REKSDRFRTP LFCVMSAASL
NSVKKFEETL FSSMASAISS VHATKEGILR KLQRGKEKAV LFLVLDEIDH LVLVKQGSSK
KRTGGEKILQ WLLDWAADPK IPFALIGIFN SIGNDRFGRL HEIGKFRNTV TFSSYDHNEI
VSILKSRVGN RIVAPNALTF IAKKVQQSSG DARKALEDMS LAIKFCLDSL SDSEKTSRNN
AILVNMQHAV KVFSVVSKDF QERILTLPYL SKVILCVVVT LAQAKVSTTT VGILKRAVTD
CVMQTNEDEL VSLENFQFML ADLVDKGLLC FEGKGSEDDL CQQQHMPVRL GTQLDDVEQV
LEKDLSQQQF FGKLRALARD RATEFRR
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