Gene PHATRDRAFT_42510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42510 
Symbol 
ID7196688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp257414 
End bp258591 
Gene Length1178 bp 
Protein Length354 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177050 
Protein GI219110597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.891249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGTACTAG AGTTGAGCCG ACGCTATTTA CTCTTTTCAG TTAGTCGTAG GATAACTTCC 
CGATTGATGC CATTCATTGG TTCGCTCTTG TTTTCGCTCA TCAATCACAA ACCATGGCAG
GACTTGAATC TATTGCTCTT GCTGTAGCTC AGCTTGAGCG CGCAAGCGCA CGCGAAGACA
CTGTAAGCCG TGGTGCCGTA TCGCCACAGG ATGGCGCCAT TGAAGGACCA TCGCACCTAT
CTTCTTTCGG AAGCCAGCCT CCCACTCTGC CTTCGCGGTC GGCGTTTATG CCAGCTTCGC
GAATTGTATC TACTGATTTT TCGCAATTTG CTTCTCCACA CGGCTTTACC TTTCACGCAC
CAGTATTGCC GACGCCTCAA CCACAAAATT CCTCATCTGA AGGTGGCCGC ACTCCAGACG
CTTCTTCGCC GACCGAACTG TCGGAATCCT CCATCGCTGT TGCTCAGAGT GCGATGGATA
ACCTCATGTC AGTAATGGGA TTAGCCGAAA GGTCAACTTC TTCATTAATC AAGTCCCCAA
CTGATCCAAT CGAGAAGGTA TTACTGAACG ATGTGCTGTT GGGACGAGGC GGGGAAACCA
ACCATCATTC GGGAAACGTG TTTTACCGTC ACCTCGTCAA GGCCTGCCAG CCGGCCTATA
TATCTGCCAA GCGTCGAAAC AAGCCTCGCA TTGCCGAGAG TATCGTGTAC ACGGTTCGCC
AGCTCGGCGG GCGTTTCATC AAGAAAGGTA CCGGAGACAA CGTCTGGGTA GATGTTGGCA
ACACCAAGGC CCGCGAAAAG ACTTCGCAAG CTCTTCGAGA AGGCGCACCT GACTTGCGCA
ACGGCAGTCC CATTAAGGGC GCCGAAGAAA AAACTGAGGA AGGCTGTGGA CCCGGCCTGG
TGCTAGTCGA AACCGCCCAG CCTGAGCTAA ACTCTCCAAC GAAGAAGCGC CGAACAAGTT
TGGATGCGCT AGCCCGTGCC GCTGCGAGCA CGACCCCAGG AATGGATAAC AATTGTGACT
TACTGTTAAT GACTCGATCA CCCGACTCTT CCATGAATAT TACGGCGAGC GTATCGGGAG
ACGAAGAATC TTCGAAGCAG TCTAAAAGGT CCAATTCGTC GCTTGGACCT CGTATCAAGC
TTTTGAAGCG GCGTTTGGAA AACGATAATG GGCTTTGA
 
Protein sequence
MAGLESIALA VAQLERASAR EDTVSRGAVS PQDGAIEGPS HLSSFGSQPP TLPSRSAFMP 
ASRIVSTDFS QFASPHGFTF HAPVLPTPQP QNSSSEGGRT PDASSPTELS ESSIAVAQSA
MDNLMSVMGL AERSTSSLIK SPTDPIEKVL LNDVLLGRGG ETNHHSGNVF YRHLVKACQP
AYISAKRRNK PRIAESIVYT VRQLGGRFIK KGTGDNVWVD VGNTKAREKT SQALREGAPD
LRNGSPIKGA EEKTEEGCGP GLVLVETAQP ELNSPTKKRR TSLDALARAA ASTTPGMDNN
CDLLLMTRSP DSSMNITASV SGDEESSKQS KRSNSSLGPR IKLLKRRLEN DNGL