Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42510 |
Symbol | |
ID | 7196688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 257414 |
End bp | 258591 |
Gene Length | 1178 bp |
Protein Length | 354 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177050 |
Protein GI | 219110597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.891249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGTACTAG AGTTGAGCCG ACGCTATTTA CTCTTTTCAG TTAGTCGTAG GATAACTTCC CGATTGATGC CATTCATTGG TTCGCTCTTG TTTTCGCTCA TCAATCACAA ACCATGGCAG GACTTGAATC TATTGCTCTT GCTGTAGCTC AGCTTGAGCG CGCAAGCGCA CGCGAAGACA CTGTAAGCCG TGGTGCCGTA TCGCCACAGG ATGGCGCCAT TGAAGGACCA TCGCACCTAT CTTCTTTCGG AAGCCAGCCT CCCACTCTGC CTTCGCGGTC GGCGTTTATG CCAGCTTCGC GAATTGTATC TACTGATTTT TCGCAATTTG CTTCTCCACA CGGCTTTACC TTTCACGCAC CAGTATTGCC GACGCCTCAA CCACAAAATT CCTCATCTGA AGGTGGCCGC ACTCCAGACG CTTCTTCGCC GACCGAACTG TCGGAATCCT CCATCGCTGT TGCTCAGAGT GCGATGGATA ACCTCATGTC AGTAATGGGA TTAGCCGAAA GGTCAACTTC TTCATTAATC AAGTCCCCAA CTGATCCAAT CGAGAAGGTA TTACTGAACG ATGTGCTGTT GGGACGAGGC GGGGAAACCA ACCATCATTC GGGAAACGTG TTTTACCGTC ACCTCGTCAA GGCCTGCCAG CCGGCCTATA TATCTGCCAA GCGTCGAAAC AAGCCTCGCA TTGCCGAGAG TATCGTGTAC ACGGTTCGCC AGCTCGGCGG GCGTTTCATC AAGAAAGGTA CCGGAGACAA CGTCTGGGTA GATGTTGGCA ACACCAAGGC CCGCGAAAAG ACTTCGCAAG CTCTTCGAGA AGGCGCACCT GACTTGCGCA ACGGCAGTCC CATTAAGGGC GCCGAAGAAA AAACTGAGGA AGGCTGTGGA CCCGGCCTGG TGCTAGTCGA AACCGCCCAG CCTGAGCTAA ACTCTCCAAC GAAGAAGCGC CGAACAAGTT TGGATGCGCT AGCCCGTGCC GCTGCGAGCA CGACCCCAGG AATGGATAAC AATTGTGACT TACTGTTAAT GACTCGATCA CCCGACTCTT CCATGAATAT TACGGCGAGC GTATCGGGAG ACGAAGAATC TTCGAAGCAG TCTAAAAGGT CCAATTCGTC GCTTGGACCT CGTATCAAGC TTTTGAAGCG GCGTTTGGAA AACGATAATG GGCTTTGA
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Protein sequence | MAGLESIALA VAQLERASAR EDTVSRGAVS PQDGAIEGPS HLSSFGSQPP TLPSRSAFMP ASRIVSTDFS QFASPHGFTF HAPVLPTPQP QNSSSEGGRT PDASSPTELS ESSIAVAQSA MDNLMSVMGL AERSTSSLIK SPTDPIEKVL LNDVLLGRGG ETNHHSGNVF YRHLVKACQP AYISAKRRNK PRIAESIVYT VRQLGGRFIK KGTGDNVWVD VGNTKAREKT SQALREGAPD LRNGSPIKGA EEKTEEGCGP GLVLVETAQP ELNSPTKKRR TSLDALARAA ASTTPGMDNN CDLLLMTRSP DSSMNITASV SGDEESSKQS KRSNSSLGPR IKLLKRRLEN DNGL
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