| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42442 |
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| Symbol | |
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| ID | 7196645 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 67387 |
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| End bp | 70840 |
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| Gene Length | 3454 bp |
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| Protein Length | 980 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177010 |
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| Protein GI | 219110517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.285973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTGCAATC GCGGCATCCC CCGGCATTTG TGTCGTTCTT GTCGCCTCAT TGCCGCCTTG
CATTCCCTTG CTTGAGTTTC TTCTTTCCGT ACTTTTTCCG TATTGAAAAC TGCCTTTCAC
CATGGCTTCT CCCTCTTCCG GCGGTAGCCT TTCGTACGTT CCAACGCCGG TAGAACGGGT
ACGTGTGCAG TGTGTGTATG TGTATGTGTT TGTGTGTGTC TCTATCGTGT ATGGGATGGA
CTGAAGGGTG CGTTAGTCCT GTCGGAAGCG AGCGCTACGA CACCATTGCA ACAACAAGCA
ACGAGTTCAA GCTTGTCACA GTGTGACTGT CACTTGGACG GGGAACTTTG CCTTTTGAAT
TGGACTGACT GTGCCTGTGA CTGTGTGCAT ACAGCCCTAC TTTGAAGGAC TCTTTGCGGC
AGCCGATACC CAAGGCGGAG GGCAGATTGG TGGAGCCCAA GCTGTCCCGT TCTTTCAGCG
TTCGCAGCTT CCCACCGAAG CTCTCCGCAA CATTTGGACG ATAGCCGATC AACCCCCCAC
CAATGCTTTG GATCACCGTA AGTTTGCCGT CGCGATTCGG CTCATTCAGC TTTTGCAGAA
CGGAAAGCAA GGCGAAGGAC CCACTCTACA GGCTCCACAG GGTGTGGATT TGCGTCCCGT
GTACTTTGAA GGAATCAGTG GTGTTTCCGT CCCCCTCCCG TCGATGGAAC AACAGCAACA
TCCACACCAA CCGCAGCCAC AGATTCCTCC CGTGCAGCAA CAGCCACATC CACAGCAACA
ACAACAGTAT CCTCAACAGC AGCACGCCCA CCACACTCCG CCCCGCCCTC CGTCGTCAGC
ATCGCAGTAC GCTCCACCCG TGCAGCAACA ACAGCAGCCG CCGCGCCCTC CTCCCTCCAC
GAGTATGGCC TTGACGCCAC AAGATCCGTA CACGCTCCCA CCCAATGAAC AAGCCCGCTA
CGAGTCCATC TTTGCCGAAT ACACGCAACC GGACGGATTT GTTCACGGCA AGGAAGCCGT
CGCGCTATTT TCCAAGTCGG GCCTTCCCCA AACACAGTTG GCAAGCATCT GGAACATGGT
CGATACACCC GTGGATAATA AACTCGACAA GGTGGAATTC GCGATCGCCA TGCATTTAAT
TGTTTGCATT TCCAAAAAGA ACCTACCAAT GCCACCCTCG TTGCCGCTTT CGCTCAAACA
GCTTAAATCG CAGGCCCCGC CTCCGACCTC GGTGCAAACC CAGCTTCCCA CAGTTGGTGC
AACTTCCTCC CAAGGATTGC CCTATCAACA AGAGCACCAA CAACACCAGC CGCAGCAGCA
GCAGATTCAT CGTACCATGA CCAACGATGC CGGTTCGGTG GCTTCCGTTC CACCGCCTCC
GGTTATCTCC GGGGGTCCCC CACGGTCGAT TCAGTTGCAG CCCCAATCCC AGCAGCCTCC
GCCCAGTGGG TTGTCGGTTT CCGCGTCTCT CCAGGGTCCA CCGCCACTGC CAGCTCGTGG
TGAGGGTGCG CTGAGTATCT CGGACGCGTT TGAAGGATTA TCCGTGGACG GAGCAGCGGG
TTCGTCGTTT TTGCCCCAAA CACTCGCCCC CGCCTCCTTT GGTGCACCGA ACAACCTCGG
CACGACGGCA TCCTTCGACA ACGCCAGTCA CGCCAGCAAT ACTGGTGCAG TCAGTGACGT
CGGTGGGGGC ATTCCCAGCC CGGGACGCAA CGCCGCCTCG TCTTTTGCCA TGGGACCTCC
GGCGATTGTG ACGGCCACCA GTCCGGCGCC AGCGCCCAAA ACAACCCAAC AGCTCGCGTC
TAGCTACAGC ATGGGTGACT CAACGCAAGA ACTGGAAAAG CTCAAGGACG TTTTGCAAAA
GTTGCAGGCG GAGAATATTG CTCTCAAAGC ACAGCTGGGC ACGATGACGG GCGACGAGAA
GGATGTCCTA AAGCAATTGG GTGCGACGGT CGCCGAAATA TCCACTCTCT CCAATGAATT
GACTACCGTA CGTGCACAAG TGCTAGCATC CAAGTCCCGC TTGGTGGAAG CAACTGCGGA
ATTGCAGGCA GCCAAGGAAA AGAAAAGGTA AGGAGATTGT CTAAATGGGG GAAACACAAT
GAAGGAAGGG TAATCATCGA CTTACCAACA CATTTTGTTT TCTCTTTAGT GTCGTCAAGG
ATCTGATTTC GGAAGCCAGC GAAACGAAGA GTGCTATTCA GCAGGCTCAT ACAGGTGTAG
AAGAAGCAAT TGAAATGGCG AAGGCCCCAC CTCCGGCAGC AAACGGATTT GACGGCGACT
TGTTTGATTT CGGCGGAGCA GCTCCCGCCC CATCGGGTCC TGTCGCCCAG GACAGTTCCT
ACGCTTCGAA TGCGGAGTCC ATGCACCCGA ACCCAATCAC GGAGCCGCCG GCGTATCAAA
ACAACCAGGT ACTAAAAACA GTTGCGTCAA ACGACTCCGA GTATGGACAA TTGAAGGAAG
CGGTCCTGTC AACAGACACG TTCAATTCAA GCTACGGAGA AGCATCGAAA GCAGGGTTGT
CGAACTACGC CTCTCACTAC GGTCAGCTGG AAACAGTGAC ATCGTACGAA TCCAACCAGT
CGGATGGAGG TCCGGGTCAC AACCGCACCG CTTCCGCAGC TTCGTTGGGT TTCGACAGTA
GCATGGTAAT GGGCGGCGCA CCGCTGGACT ACTCCACGGG CTCTACTTTA GCCGGACCGC
CCCCGCCAAC CGATCGTTAT CAAGGCAAAA ACGCAGATGA CCACAATTCG ACGCCGTCGA
TTGGAGATGT CAACGAATTG AGGCGCAGAG CCAAAGAGGC AGAGGACGTC GCACGAGATG
CGGAAGAGTC GCGTCAGCAA GTGGCAGCTC AAGTCGAAGA GCTGCGTCGT GTGGCCGATG
AGGCGGAAGC GGAAGCTCGC AAACATTTGG CCGGTGGAGA CGGCAAGAAG AAGAAAGTCG
GTATGCTGGG TCGGGGTAAA AAGCGAGATG CGGTACGTAA GCTTCCTGGG TCCATTGTAC
CGGCCAATGA TTCTTAACGA ATCTTGGTTG AAAAAGACTT ACCTTTATTG CTTTTCGTAC
ACAGAAAGAA GGAGAGCGGC TCGCACTGGA GGCAAAAACC AAGAAGGATA CGTTTCTCCA
GGCACAGTCG CAAGCCAATG ATGCCCAGGC TTTGGCACTG GACACAAAGC GCGAAGCCGA
TCGTTTGCGG CAGCAAGCCG AGGAGGCCGA AATCAACGCT GCGTCGGCCG CTTCTATGCA
GCATAGCCAG CCGGTCGCTC CTTCTCAGCA GCCATCCAAT GGATACCCAG CACCAGCTGC
TACTCCAGCG TACGGAACAG GAATGGGACA GCAACCCCAA TACGGGGGTA CATCTTTTGG
CGGACAATAC AATCCCAACG TCATGGGTAG TGGTGGCGTT GAGATTCCCA CACCGAGCGG
AGGCGAAGAT CCATACTCAA ACCCTTTCGG CTAA
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| Protein sequence | MASPSSGGSL SYVPTPVERP YFEGLFAAAD TQGGGQIGGA QAVPFFQRSQ LPTEALRNIW
TIADQPPTNA LDHRKFAVAI RLIQLLQNGK QGEGPTLQAP QGVDLRPVYF EGISGVSVPL
PSMEQQQHPH QPQPQIPPVQ QQPHPQQQQQ YPQQQHAHHT PPRPPSSASQ YAPPVQQQQQ
PPRPPPSTSM ALTPQDPYTL PPNEQARYES IFAEYTQPDG FVHGKEAVAL FSKSGLPQTQ
LASIWNMVDT PVDNKLDKVE FAIAMHLIVC ISKKNLPMPP SLPLSLKQLK SQAPPPTSVQ
TQLPTVGATS SQGLPYQQEH QQHQPQQQQI HRTMTNDAGS VASVPPPPVI SGGPPRSIQL
QPQSQQPPPS GLSVSASLQG PPPLPARGEG ALSISDAFEG LSVDGAAGSS FLPQTLAPAS
FGAPNNLGTT ASFDNASHAS NTGAVSDVGG GIPSPGRNAA SSFAMGPPAI VTATSPAPAP
KTTQQLASSY SMGDSTQELE KLKDVLQKLQ AENIALKAQL GTMTGDEKDV LKQLGATVAE
ISTLSNELTT VRAQVLASKS RLVEATAELQ AAKEKKSVVK DLISEASETK SAIQQAHTGV
EEAIEMAKAP PPAANGFDGD LFDFGGAAPA PSGPVAQDSS YASNAESMHP NPITEPPAYQ
NNQVLKTVAS NDSEYGQLKE AVLSTDTFNS SYGEASKAGL SNYASHYGQL ETVTSYESNQ
SDGGPGHNRT ASAASLGFDS SMVMGGAPLD YSTGSTLAGP PPPTDRYQGK NADDHNSTPS
IGDVNELRRR AKEAEDVARD AEESRQQVAA QVEELRRVAD EAEAEARKHL AGGDGKKKKV
GMLGRGKKRD AKEGERLALE AKTKKDTFLQ AQSQANDAQA LALDTKREAD RLRQQAEEAE
INAASAASMQ HSQPVAPSQQ PSNGYPAPAA TPAYGTGMGQ QPQYGGTSFG GQYNPNVMGS
GGVEIPTPSG GEDPYSNPFG
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