Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42434 |
Symbol | |
ID | 7196621 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 41016 |
End bp | 42852 |
Gene Length | 1837 bp |
Protein Length | 484 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176508 |
Protein GI | 219109507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCGT CCATGAGCAT GAACGAAACG GGAGCGTCTC CTTCTTCGGG AGGTGCTGTA CCTACCACCG GTGACTTTGT GGATCTCCAC GAACTCTCGA AAGGATGGAA AGCAGCAATT ACCAGAGCCA AGGACCCTTC TACAAGGTAC GCCGTTCCCT TCCGCCTTGT GCAGATCATT CCTCGAACCG ACAGTCGCGC ACTTGTGTAT ACACACTCAC ACTCGTATAC ACATACTCGT TGATACACAT TCTCACACAC ACACACTCAC ACCCACATAC ATACATACAT ACGTAGGTAC GAAGCGCGCG TCAAGAATGA TCGCGGAAAC TTGCCGTTGC ATTCGGCAGC GTCGTTCCGT GCTCCACTGG AAGTAGCCGA AGCACTCCTC GCGGCCTACC CGGAAGCGGC CTCCATCACC AACAACTACG GAAACCTGGC ACTGCACTTT ACGGCCTGGA AGAAAGGTCC TCTGGATGTG GAACAGCTAC TCCTCAAAGT GTTCCCCCAA GGGGCGGCGC AAAAGAACAA CCACGGCAAN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNT CCATGGAACA GCGAGATGGC ATGACCGAAG AACGCGAAAT GGTGCTCGCC ATGTTGATGG ATATGAAGGA AAATCATCCG CACGCCTTAT ACTCGGCGGG CATTGATCCC AAGGCCGTCA CCGACTTGGA CTCCATGCTG GAACAGGTGC GCAAAGCTTC GGTTGAAGAA ACAATTCCTC CCGGGAGCAG TGACGAGGAA ATCGATGCAC AGCTTATTGA AGAATCACTA TGTCCTCCGG ATGATCCGGT CGAAGTGGCG TTGGCCGGTG TGATTGGATG TAGCGCGGTC AAAAACCAAA TCCGCGGACT GCGACGTACC ATTGAAATAG CCGCAGCTAC TGGTGAAGTC TCCAAAATCC CGCGTCACTT GGCCTTTATC GGAAACCCAG GAACCGGCAA GACCATGGTG GCCCGCAAAA TGGTCAACAT CCTGCGTAAC GTGGGAGCCA TACAGAGCCT CAACTTTGTC GAAGTGGGCC GTGAAGATCT CATTGACAAG AAGAGTGAAG CCCGGACCGT CTTCAAGACA CGAAAAGTAT TGGAACGTGC CGCCGGAGGG GTCTTGTTTG TCGACGAAGC GTACACTTTG TTGCCCTCAA CGGCCCGTCC GCGTGGACGC GATCACGGAG CGGCAGCTTT GCGGGAGATT GCCCGAGCAC TCCCCGGCGG AAACCCACTG GTCATTCTGA CCGGTGCACC CTTGGATCTG CAGCGTGTAC TCTCTAGCGA CATTGGTTTC AAGGGACACT TTTTGACCAG AATCGAGTTT CCGGATGCGA CCCCTCTACA GATTGCACAC ATGTTCATGG CAAAACTGTC CGAGAAGGGA CTCATGCCGG CCCAAGGTGT CACCCCACAG TACCTGGGTG AGCTGATCAA GTCGAATACG GAAGCCGAAT GGAGGCAGGA GCGAAACGGT CGTATTGCCG ACCTGTTACT GCTGGGCGTC CGGGCCGAAG TCAAGAAACG TGCCGTCTGG GACGATACCG CGTCCAAGGG ATCGTTGAGC CCCATGAAAA TTCTTAGCCC GGGATCTTCT CGCATGCCTG CTTTTGCCCC CGAAGAAGTA TTTGTGAATG TGGAAGATAT TCAGAATGCC ATTGTGAACG GCATGTAAAC GTTCAAATGC TAACCCGATC CTTGTGTTGT GATTGAGCCG TCGGGCGTCG AGCTTAGACG TGAACGGTAC GATCCGGGTT GCAGACGTCG TCTAGTTTAA CTACTACATA GCGAGCCGTT GCCGAAT
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Protein sequence | MASSMSMNET GASPSSGGAV PTTGDFVDLH ELSKGWKAAI TRAKDPSTRY EARVKNDRGN LPLHSAASFR APLEVAEALL AAYPEAASIT NNYGNLALHF TAWKKGPLDV EQLLLKRDGM TEEREMVLAM LMDMKENHPH ALYSAGIDPK AVTDLDSMLE QVRKASVEET IPPGSSDEEI DAQLIEESLC PPDDPVEVAL AGVIGCSAVK NQIRGLRRTI EIAAATGEVS KIPRHLAFIG NPGTGKTMVA RKMVNILRNV GAIQSLNFVE VGREDLIDKK SEARTVFKTR KVLERAAGGV LFVDEAYTLL PSTARPRGRD HGAAALREIA RALPGGNPLV ILTGAPLDLQ RVLSSDIGFK GHFLTRIEFP DATPLQIAHM FMAKLSEKGL MPAQGVTPQY LGELIKSNTE AEWRQERNGR IADLLLLGVR AEVKKRAVWD DTASKGSLSP MKILSPGSSR MPAFAPEEVF VNVEDIQNAI VNGM
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