Gene PHATRDRAFT_42429 details

Gene Information

• Locus tag: PHATRDRAFT_42429
• ID: 7196618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 30314
• End bp: 34211
• Gene Length: 3898 bp
• Protein Length: 625 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002176507
• Protein GI: 219109505

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAACAAAGCG CGATTGCAAA CAGCAAGCGC CAACGGAAAA GCGCCAGTTG TTGGCTCGAC 
TCCGTTTGGT TTGCACCACT GGAGTAGCTC TCTACAGTCT TTTGGATTTG TGAGCTCTCC 
ATTGGTATAG AAGGTCTGGC AATTGCAAGG ATCTTCGCCA ATTCAGTTGG GAGACCTTTA 
GGGCGGCAAC AGTCAAACAA GGTCAAGCGC AGCGATCGAC CGCGCGAGGG TTGCTTATCA 
GCTGCCTTGA GTGACGCTCC CTACGTACAC CGCTTTTATC ATGAACACGA AAGAATACCT 
GTATTCGTGG CATCTCTCGC TGCGAGCGGA CCGTCCAGTG GAAGGTTGTG GGATGCGCCC 
GCACGCCTAC ATGTACGGCA AAAAATTAGA CGAACGCGAA GACAAAACGC TGCCTCCGCA 
TTCCAAAAAA ATGAAAGAGC CACCACCGCA GCACGAATTC TCCTATCGAT GGTTCCGCAG 
TCCTTTGCAT GAGCCTTGTG CCTACGAGAA TTGTCCTCGT CGAACTTCGT TCTCTCCACA 
CGATTGGTCC AGACATGCTT TAGGTGGAAC GGAATGCGGA TTGCAGTGTG TATCGACGCA 
AAGTTCCTTG TTTCGATGCA CGTTTTGTAA TTCTACTTGC TTTGTGAATG CTTGGAAGAC 
TCAGTACAGT GTTCCGAAGG AGGCCACTCG GACGGAAACT CATGGTCGGA CCCGTTCACA 
ATCTTTTGGT AGTAATGATG AAGACGTCTT TGACGATACG GGTAGTGTAC GGTCTTCGAA 
TGGATCTAGT CCAGCTCTCG ACACCCTCAG CTCGCCACCA CCATCGACTC CCCGTGGGTT 
CCTCAGTGGA TACTCGGCGG GCAAGCAGCT GAACCCCGCC TCTGGTAGCA GTATGTACCA 
CTCGGAATAC GATGCTGGTG ACGATTGGGT GGAATTCAGT CGAGATCAGC TTTACATGCC 
AGGCCCTGAA GATGTCGGAC ACAAGCTCAA AATTGAAGCT GCGGCGTATT CAACCGATAC 
CAGTGAACTA CTTATGTCAC GTGTTGTCAA AACAGACGTT GTTCTAGGAA GGGCTCCTGA 
CCCACTTAAA AGGCAACTAG TTACCACTAA GGGCGGTGGA GGAGGTGGTC CTCGTTTCCG 
CGTTATAACG TACAATGTTC TCGCCGAGAT TTACGCAACT CAACAGCAGT ATCCTTACTG 
CGACTTCTGG GCACTTTCAT GGGATTATCG ATTCCAAAAC ATTCTTCGCG AGATCATTGA 
TGCATCGCCA GAAGTTGTAT GCTTGCAAGA AATTCAAGCG GATCACTACG AGAATCACGT 
TTACGTGGCC ATGGCTGACG CGGGATTTGA AGGCGTCTAT AAGCAAAAGA CGAGACAGAG 
TATGGGACTT GCTGGAAAAG TCGACGGATG TGCTTTGTTT TGGAGACGTT CCAAATTTCA 
TTTGGTCGAA TCCTACAGCA TTGAGTTCAA CGAAGTTGCG CAGAGACAAG CGACTCAAGT 
GTTAGGCCTC AATCCACGAA GCGAAGAAGG TGTGGCCTTT TTAAACCGTC TATCGAAGGA 
TAACGTGGCA CAGCTTGTTG TTCTAGAATT CATCCAGCCT AGTCGATCGA ATCGCGAAAT 
ATCGCAAGTG TGTATTGCCA ATACGCATTT GTATAGCAAC AAGGACTTCC CAGACGTAAA 
GCTGTGGCAA ACATGGCAAC TTTTGCAAGA GCTGGAATCA TTCATTATGA GTCGCGGAAC 
GAATCTTCCT TTGATTATTT GTGGAGACTT CAACTCGACT CCAGATACAG CCGTCTACGA 
TCTACTCTCG AGACAGACAG TCCATCCCGG CCATCCTGAT GTAAATGTTA CGACTGGCGA 
CGACGTTCCT AACGTTCTCC CTGATGCGAT GAATATTACT CATTCGTTCC AGCTGGGCAG 
CGCCTATCAA ACAGTATTGG GAGAGGAGCC GTGGACGACG AACTTTACTG TCAATTTTAA 
GGGCGTTTTA GATTACATAT GGTATTCCGC CCAGAATTTG CGGCCGCTCT CAGCTGCCCC 
GATACCAGAG GAAAAGCAAT TGACAAAGAA TGGGGAAGCT TTACCTTCGA CAGAGTACAG 
TTCAGATCAC ATCATGCTGA TCTCAGATAT GCAAATTATT GGCAATGGAG CACGATAAAG 
AAAGATCTAG GAGAGAATGA AAGGATGTGT GCTATTGTGG ACCGCCTTCT TTTGTAGTAG 
CGCTCAATTT TGTTATGGTA GAAGTAGAAA CTTTGATGGT GGGACGAGGA AGAATAAAAT 
CTGGCAATAA TGGCATTACG ATCACTTGGC ACTCCCCCCC AAAAGCATGG CGTAGTCATG 
GCCTCCGTCG TTTTCCAAGT GAGTCACCAT CTTTTCAAAA TCTTGGACCC ACATCATTTG 
CTCTGGTCCG CGGCCTGATG GCATTTTGCG TTTGGATGCC GCGTCGAACT CAACGGAGCG 
AATAGGCTTG CCGTTCAGCA GTACACGAAC GACGTGCGAG TGTGAGTCCA CCGGTCCCTC 
TTTGTGCAGC CGCACAAGTT CAAAGACCAA AGAACTTCCG TATTCCGGCC AAAAGCGCCA 
GTCGGCACTG GTGTCGTCGG CCAAAAAGTC GGCTCCTATT CCGTACAAAA GACCGAGGAT 
TGTGATGTCG TGACAACTAT AAATGGTGAA TGGTCGCTTT TCTTCGGTGT TGAGGCTTGG 
TGCAACCTTC AGCGATTCCG TAATCTCTCT CAGTGGCGGT GCGGCGATTG CGGCCAAAAG 
GCGCTTATTC TGGTACCATT TTCGGAATCT CCATGACAAG TGCATCAATG TTTGATGCGA 
GAGTGAACAT AGCATTTGTT CAACTGAAAC ATCATGCTCG TAGTCAGAAA ACCGGGCCAA 
GTCCATTCCG TGTGATGATC TGCAGACAAA ATGATCAGCG GCTTCGACCC AGTTGATCCC 
GCTCGGTGCT CGCGAGCTGA AATCGCTCTT TCGGGGCCTC ACTAAACCAG GAAGAATATT 
GGCCAAACGA GCCGCTAGTG GCGCCGCAGC CCCATCGCGC AGCATGAAGT CTTCTGATGA 
GATGACTTCA TCAACTAGAT CAGCCATGAG ATCTGGGTTG CGATCGAACG CATTTAACGG 
GTCTCGGGAG AGCTCTCGGA CACGGACTTT GACAAGTTCA TCCTTGCCAA AACTCTTCCC 
TCGCCAAGCG TGGTTCGGTA CGCGAGCTTC TTCAAATATG TCGGGATTTA GCGTCCGTTG 
CGGGGAGGGC GTATAACAGT TTGCACCCAG CATGCCATCA AGAAAGCTTT GAACTGACAT 
AATGGTACGT AGATAGTTCG TAGAAAACAC TTTAACATCC CAAACGGACA GGAAGTCTTC 
GGGGTTTTCC CATCGCCATT CGCTAAGGTT CGGTGAGTGA TGCCCATAGT GATTGTATCG 
ATGGAAGAAT CGGTGTCCGT TTTCTTTTAA CTGCGACAAT CCCATCTGCG TTAAAAAACC 
GAAAGGATTA CGGCCCACAT CAAGAAACTG ACCATGATTC GTGTTTTGAT GAATGTCGGG 
CGGGAAGCAC CTTGAGTATG CTTCAAAGGC TGTGGCAGAA TCAGGTGATG GCAAACGTGT 
CATCCAATAG GCAGCTTCTT CCTTTCTACG ATGGGATGGA GAAAGCGGCC TACTTGGTGT 
TCTATCTCCA TGTCGGCAAA ACATCCAGAC GCCCTCGACG ACACCATCAT TCTTCAAGTA 
GCGATGTGGG TCTTCATCCG CTTTTGACCC AAATGCGCCG GATGAGTTGC GTCGAAACCT 
ACCTATAAGT CGAGAAGATC GTTTCGACCC TTCCAAGCCA CGAAGCGCTG TTGAACCCAA 
CTTCTTGGGT CTCATTGTGA CCCTTAAGGG CAACCTCAAG AATACGCGGG AGTGCGCA 

 

Protein sequence

MNTKEYLYSW HLSLRADRPV EGCGMRPHAY MYGKKLDERE DKTLPPHSKK MKEPPPQHEF 
SYRWFRSPLH EPCAYENCPR RTSFSPHDWS RHALGGTECG LQCVSTQSSL FRCTFCNSTC 
FVNAWKTQYS VPKEATRTET HGRTRSQSFG SNDEDVFDDT GSVRSSNGSS PALDTLSSPP 
PSTPRGFLSG YSAGKQLNPA SGSSMYHSEY DAGDDWVEFS RDQLYMPGPE DVGHKLKIEA 
AAYSTDTSEL LMSRVVKTDV VLGRAPDPLK RQLVTTKGGG GGGPRFRVIT YNVLAEIYAT 
QQQYPYCDFW ALSWDYRFQN ILREIIDASP EVVCLQEIQA DHYENHVYVA MADAGFEGVY 
KQKTRQSMGL AGKVDGCALF WRRSKFHLVE SYSIEFNEVA QRQATQVLGL NPRSEEGVAF 
LNRLSKDNVA QLVVLEFIQP SRSNREISQV CIANTHLYSN KDFPDVKLWQ TWQLLQELES 
FIMSRGTNLP LIICGDFNST PDTAVYDLLS RQTVHPGHPD VNVTTGDDVP NVLPDAMNIT 
HSFQLGSAYQ TVLGEEPWTT NFTVNFKGVL DYIWYSAQNL RPLSAAPIPE EKQLTKNGEA 
LPSTEYSSDH IMLISDMQII GNGAR