Gene PHATRDRAFT_42428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42428 
Symbol 
ID7196639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp29081 
End bp29839 
Gene Length759 bp 
Protein Length252 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177001 
Protein GI219110499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATGC TTGGTCGCTT TTGTGTCTTA TTCTCTCTCA TGTTAGCTGC ACGAAGAGCG 
GTCGCTTGGA CGAGTAAAAG TGGTTCGACA GAAACCTCCT TTCGAAGATT GTACCATCGG 
CTTCCAACAC TCCCTCGTCC AGGCCTCGTG TCGCCCGCCA TGATCCGACA GAGAAAGCCT 
CCGTCATTTT CTTCGAAAGC ACTCTACGAA CAGTCACTCA CGTCTATCGT CAGGGGAATG 
TCAGATTCTA CTGATGACGT CGTTATTCCA GACTTTCAGC CAGGTGATAA GATTCAAGTC 
GAAATCATGT CGTTCGGTCC GCTGGGTGCG GGTGTCGAAG TGATTGGGCT CAGTCACGAC 
TCCGACAGTT TGATATCCGA AACGGACCCT CCGCTCGCCC TCGGGCTGAT TTTGCAACGA 
GAAATTCGCT ACTTTCGACA GGGAAGAAAC AATGTAGATG TTGTTCAAGG AGAAGTACTG 
CCGGCCTACG TCGAACGGGT GCGTGAAACT GGTCGAGTGG ATGTTTCTCT GCGTGCCTTT 
GGTGGAAAAG CCAAGGCGCT TGAAGTGTCG GACCTGATTC TAAATAAACT GAATGTAGAG 
CCTGTTCTGT GCGTGGGGGA CAAGTCATCT CCGAAAGAAA TTGCCGCAGT TTTTCCTGGT 
GTCAGCAAAG CATCTTTCAA ACGAGCTGTA TCAGCTTTGT ATAAGCAAGG CAAGGTACAG 
CCAAATGCCA CTTCTATCTC TCTCATGACA GATAATTAA
 
Protein sequence
MLMLGRFCVL FSLMLAARRA VAWTSKSGST ETSFRRLYHR LPTLPRPGLV SPAMIRQRKP 
PSFSSKALYE QSLTSIVRGM SDSTDDVVIP DFQPGDKIQV EIMSFGPLGA GVEVIGLSHD 
SDSLISETDP PLALGLILQR EIRYFRQGRN NVDVVQGEVL PAYVERVRET GRVDVSLRAF 
GGKAKALEVS DLILNKLNVE PVLCVGDKSS PKEIAAVFPG VSKASFKRAV SALYKQGKVQ 
PNATSISLMT DN