Gene PHATRDRAFT_42322 details

Gene Information

• Locus tag: PHATRDRAFT_42322
• Symbol: CK1
• ID: 7198380
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 402924
• End bp: 405337
• Gene Length: 2414 bp
• Protein Length: 310 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184539
• Protein GI: 219128689

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.942798
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGC GGGTGGGTAA AAAGTACCGT CTCGGTCGGA AGATCGGTTC CGGTTCCTTT 
GGAGATATTT ATCTCGGAAC GAACATGACT ACGGGTGAAG AAGTTGCCAT CAAGCTCGAA 
TCGGTCAAAA CCAAACATCC GCAGTTACTC TACGAAAGCA AGATTTATCG CATTCTGCAC 
GGCGGCTGTA AGTACAGACA GAGTGTTATA GTTCGTAGCG TGTCTTTGTA CACTTTGTGT 
TTTTTGTTTT TCCAACACTG TATTATGGCG AAATATCTGC AGTGGGAATC CCGAACGTTC 
GATGGTACGG TATCGAAGGC GATTACAACG TCATGGTGTT GGACCTGCTG GGTCCATCAC 
TGGAAGACTT GTTCAACTAT TGCGGTCGTC GTTTCCAACT CAAGACTGTC CTCATGCTGG 
CTGATCAACT GTTGTCGCGG CTCGAATACG TGCACACCAA GTCTTTTATT CATCGGGACG 
TCAAACCGGA CAATTTCTTG ATTGGTCTCG GCAAGCGACA GTCGGTCATT CACATTATCG 
ATTTTGGTTT AGCCAAAAAG TACCGAGACC CACGTTCGCA TCAACACATT CCCTACCGTG 
AAAACAAGAA CTTGACAGGA ACGGCCCGAT ATGCCTCGAT CAATACGCAC ATTGGGATCG 
AACAGTCGCG ACGGGACGAT CTCGAGTCGC TCGGTTACGT TCTCATGTAC TTTATTCGCG 
GCTCCCTCCC TTGGCAAGGA CTCAAGGCAA ATACCAAGAA ACAGAAGTAC GAGCGCATCA 
TGGATCGCAA AATGAGTACC AGTACAGAGC AACTGTGCAA GGGATACGCC ACAGAATTTC 
GTTCGTATTT CGAGTACTGT CGGTCGTTGA GATTCGAAGA TCGACCGGAT TACGCCTACC 
TCAAACGTCT ATTCAAGGAG CTGTTTTATC GCAAAGGATT TCAATACGAC AACATGTTTG 
ACTGGACGGT TTTGAATCTG CAGCAAGAGC GTTCACGCTT GCCTCCGGAT CGCCCACTCG 
CGGCCCCTGA TACGGCGGCT CCAGCAGATG TTCAGGAAAA GAAGGAAGAG CGCGATCGTA 
GTTGTAGTGG GAACGGTGCA GCGGATCCCT ACAACAATGC CACCGGTGTC GCGGCCCGCG 
ATCCTTCCCA ACGATCGGGA TCCCGGTACG GGTCCCAGCA GCCCGGCGTG GTCGCGCCCC 
CACACGGGTC CCAGCACATT CCGTCCGTCC ACGAATCACA GACCGGGTAT CCGCCGGCGC 
AGGGAGCCCA TCACGATCCC CGGGGTCCCC AATAAACGGT GACTATAGTC GTCAGTGAGT 
CTATCTGTCC ATCTTGTAGT CTTTTCCATT CGTACTATAA AAAGAAATAA GGTTCTTTTA 
CAGATTCCGC TAGTTGCGTT CACTATACTA GAAACGGTTT GCGGTACAGT TTCATCTTTG 
ACAAAAGCTC CCTCTGCGTA GCTCATACGA CACTCGTAGA ATCTGTATTT GCAATAGCAG 
CTGCAGCTCG TCAACGATCA AGTGCGCAGA AATCTCAGAC GACGTTCACC CAAAACTATG 
TAAAGCTCTG AACGAATGTA TATGCAAGTC AAATTTTAAG TTTACGATTT CTTCCTCCAC 
ACACCGACAC TTAAGATTTT TTTTGGTTTA CATAGATGAA TCGTCGTCAT CACTGTCTGT 
TCCAAAACTG CTATTGTGTT CGCCGAACTC AACGTTGCAG TATTCGATTT GAGCCTGCGG 
TGGCGGAGGA GGCCATTCCG ATCGAGGCTT GCCGCGTACC TCCATCATGC GCTCGTAACG 
CTTGCGGTTT CGTTCCACAC GCAGTAGGCC GTCATCAAAT TTGATCGCTT CCAGTGGCAG 
CGTACCGTCA ATGTATAAGT TGTACCAGTT GCTTCCAAAG CATTGTGTAA GATTTTCGTT 
CGTAAACACA TCCATCTTTG CGCAAGCTCG GGCAATCGCC AGCTGTTCAG CACGGTGAGC 
TCGAAAAGAT TCCAAGCGGT AAATAAGGGG AAGGACCGAA AATAGTACAC AGCAAAAGCC 
AGTGATCAGT ACGATGGCAG CCAGGACAAC CCAGATAAAA TAGGCCATCC CTGTGGGTAA 
CTCATCCAAC CACTCCAGAA TCTTCCAATC GGGGTAAGAG ACGGTCCTGG TTGTAGGAGA 
TGGAGGCGAT GGAACAAGCC GAGTCGACTT TTCTGCTGGT GTCAATGAGT CGTTGGAAAT 
TAAGCCTGGC TGCAACCGTC TCAGATTTGG TCGAGCTTGA ATGTCATCTC CCTTCCGCGG 
TAAACCGTGA TAGTGAATAA GGTGTCGTGA GGATTGACGG ATTTCACCAA TGTTTTGCAA 
TATGGTAACG GCGACCATCT CGTCGATTTC AATTTCAGAG TGTTGCGAAG CAAAATTTTC 
GTCAACGATT GTAG 

 

Protein sequence

MELRVGKKYR LGRKIGSGSF GDIYLGTNMT TGEEVAIKLE SVKTKHPQLL YESKIYRILH 
GGLGIPNVRW YGIEGDYNVM VLDLLGPSLE DLFNYCGRRF QLKTVLMLAD QLLSRLEYVH 
TKSFIHRDVK PDNFLIGLGK RQSVIHIIDF GLAKKYRDPR SHQHIPYREN KNLTGTARYA 
SINTHIGIEQ SRRDDLESLG YVLMYFIRGS LPWQGLKANT KKQKYERIMD RKMSTSTEQL 
CKGYATEFRS YFEYCRSLRF EDRPDYAYLK RLFKELFYRK GFQYDNMFDW TVLNLQQELS 
VAKQNFRQRL