| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42015 |
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| Symbol | SCS-alpha |
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| ID | 7201458 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 717119 |
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| End bp | 718204 |
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| Gene Length | 1086 bp |
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| Protein Length | 309 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | ligase succinate-coa ligase |
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| Protein accession | XP_002180696 |
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| Protein GI | 219119890 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGTCAA CCGCCAAAGT GTGGGTGGAT AAGAACAGTC GCGTGATCTG TCAAGGGTTC
ACCGGAAAAC AGGTAGGTAC GGTATCTGAG ACGTCGGATC TGTTCAAACA TTTTCGTCGT
ACAGTTATTG CACAACCGAG ATTAGTGAAT CTAATTCGTG TCTGAAAATC AGCACACGGA
ATCAGTCCAG CAATAAGACT TACCAAGGCG CTTCTTCTAT CTCGGCAGGG AACCTTCCAT
TCGACGCAAG CCATTGATTA CGGCACCAAT ATGGTTGGTG GAGTCACGCC GAAAAAAGGC
GGGCAGGAGC ATCTCGGTCT ACCGGTATTT AACACGGTCC AAGAAGCCGT CGACGGGGTA
CAACCGGACG CCTCGGTTAT TTACGTGCCG CCCCCCTACG CGGCCCAAGC CATTCTGGAC
GCGATCGAGG CCGAAATCGG ACTCGTCGTC TGCATCACGG AGGGAATTCC TCAGCAAGAC
ATGGCGCGCG TCAAACACGC CTTGCGGCTA CAAGACAGGA CACGCTTAAT TGGACCCAAT
TGTCCCGGGA TTATTAAACC CGGTGAATGC AAGATTGGTA TCATGCCAGG GTACATTCAC
CGGCCTGGGA AAATCGGTGT AGTGTCGCGG TCGGGAACAC TAACGTACGA AGCAGTTTGG
CAAACTACGG TAACGGGACT GGGCCAGTCG ACATGTGTCG GTATTGGCGG GGACCCTTTC
AATGGAACCA ACTTTATTGA TTGCTTGGAA CGTTTCACCA ATGATCCCGA GACGGAAGGT
ATCATCATGA TCGGAGAAAT TGGTGGATCG GCCGAAGAAG AAGCCGCCGA ATGGCTCAAG
GAATACGGCG ACCCCAACAA ACCTGTGGTT GGCTTTATTG CTGGACTCAC AGCTCCTCCG
GGACGTCGTA TGGGACATGC TGGTGCCATT ATTGCTGGAG GAAAGGGCGG TGCGGAAGAA
AAGTTCCAGG CCCTGGAGTC TGCTGGAGTT CACGTGTCGC GCTCTCCAGC TCGTCTCGGA
GCCACCATGC TCGAAGCCAT GGGACTGGAA GCGCCGGAAA CTCCGCTTGA GCCGCAAAGT
GCTTGA
|
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| Protein sequence | MSSTAKVWVD KNSRVICQGF TGKQGTFHST QAIDYGTNMV GGVTPKKGGQ EHLGLPVFNT
VQEAVDGVQP DASVIYVPPP YAAQAILDAI EAEIGLVVCI TEGIPQQDMA RVKHALRLQD
RTRLIGPNCP GIIKPGECKI GIMPGYIHRP GKIGVVSRSG TLTYEAVWQT TVTGLGQSTC
VGIGGDPFNG TNFIDCLERF TNDPETEGII MIGEIGGSAE EEAAEWLKEY GDPNKPVVGF
IAGLTAPPGR RMGHAGAIIA GGKGGAEEKF QALESAGVHV SRSPARLGAT MLEAMGLEAP
ETPLEPQSA
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