Gene PHATRDRAFT_41615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41615 
Symbol 
ID7199431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011700 
Strand
Start bp90500 
End bp91660 
Gene Length1161 bp 
Protein Length386 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185565 
Protein GI219130845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA GACTGAAACG CGGACGTGCT TTGCTACAGA ACGGTTGCTG GATGATGATA 
CCATTTTCGA TTGGAATGCC GACGGCAACG GTCAACTCTT TCCACGCAAC ATCAGCCTTA
TTCTACTCCT TTATTCCATC ACCGACAACA AAAAGGAAGG ATTTCCGGCA GCGCATAACG
CTTTTCTCTT TCACTGGTGA CGGTGAACGT GGAGCTCTCG ATATCACTAG ACGAGAAGGG
TTGTTTGGCG GTGCCATTCT TTTGATTCCA AAAACGGCCT TCGCTGACGA AAGACCGACA
TCCGTTTCTG AAGATTTCGG TTTACTTCGC TCGACATCAG AACTTAAGGA TTGCCAAAAC
GGTGCCTTGG TTTCCGAACA AGCTATTCCA GGCGCCTACG AACAAATATG TATGGGTTTG
TCGGAAAGAA CGGTCCCAAT TAAAATGAGT GGAAACCGCA CAGCAATGCT GCGGCTTGAG
CAAGATAGAT CGGGTGCTGG CTCCACTGGC ATGGCTGTTT GGAATTCCAG CTTATTGCTG
ACGCGACTCT TGGAAACTCT CGAGGCACTT CAACCAGGTT GGATAAAAAA CGGAAATGTT
CTCGAACTGG GTTGTGGTGT CGGCCTCGTC AGTCTTACAG CTGCAATTCT TGGCGCTGCC
AGTGTTGTAG CTACAGACGG TAATCCCAAG GTCGTCGAGC TTGCTTCCCG TAATATTCAG
GCGAACGGCT ATGCCGACTG CGTGAAAGCC CAGACGCTTT CGTGGGGACT GTTGGACGCG
ATGGACAACG CGGATCAAGC GGACTGGCTT GTGGGATCCG ATCTCACTTA TAATGCCGCC
AATTGGAGAG TGTTGGCGGA AAGCATGGCA ACCATTGTGA AACAAGAAGG GTACATATTA
TACGTGAGTT TGGGACACGC TGCATTTGAC GTCAACGCGG AAACGCAAGG CTTCTTGTCG
GTGGCCAAAG AGATGGGACT TGTTGAGGTC GTGCACACGG ATGCCAATTG GCCATTTCCT
AATATCAAAA CCTCCTTAAC GGAGGTGCTT CTACGAGAAT GTGTCCAACC TATGGAGCAT
TCGATTGTGA GCCTGGCGAA TGGTGGGCGG GTGATGCTGC TTCAACGGAA ATCTACGCAA
AAATGGACCA AATCGCGTTG A
 
Protein sequence
MNYRLKRGRA LLQNGCWMMI PFSIGMPTAT VNSFHATSAL FYSFIPSPTT KRKDFRQRIT 
LFSFTGDGER GALDITRREG LFGGAILLIP KTAFADERPT SVSEDFGLLR STSELKDCQN
GALVSEQAIP GAYEQICMGL SERTVPIKMS GNRTAMLRLE QDRSGAGSTG MAVWNSSLLL
TRLLETLEAL QPGWIKNGNV LELGCGVGLV SLTAAILGAA SVVATDGNPK VVELASRNIQ
ANGYADCVKA QTLSWGLLDA MDNADQADWL VGSDLTYNAA NWRVLAESMA TIVKQEGYIL
YVSLGHAAFD VNAETQGFLS VAKEMGLVEV VHTDANWPFP NIKTSLTEVL LRECVQPMEH
SIVSLANGGR VMLLQRKSTQ KWTKSR