Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40626 |
Symbol | |
ID | 7198486 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 488508 |
End bp | 489601 |
Gene Length | 1094 bp |
Protein Length | 292 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184627 |
Protein GI | 219128872 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0127959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTACGTA GTCAGGGCAA CCCCAGAGCC TTTATTTAGT TGTACCGAGA TGAGAAAATG AAAAGAAGCC GAATGTACCG CAAGCAAGTT CGACTCAACT CATTCATTTT GCGATTTTGC AGTCTTCAAA TCGTTTTGCC ATCCTGGACG ATGACGATAC CGCTCCAGCC GTGAAGAAGG ATAGCAAGCC CGCCAAAGCT GCTGTCGAGG CTTCGAAGCC CGATGACCGG TATGTTGATT TCCTTTTCCC TGCTCAAAAC AATGGCATCT TTCAAAGTCA TATATGACGT CTAAAGATAA AATGTTCTCC CTCTTTTTGT GACAGTCGCC GTCCAAACCA AAATGACCGC AACACAAAGT TTGGCCGTGG TGGAAGAGCA CCGTCGCGTG ATGGGAAGAG AGCTTATGAT CGCCGCTCTG GGACGGGCCG CGGCAAAGAA ATCAAGAAAT CCGGTGGCGG TGCTAGAAAC TGGGGAACTG ACAAAGCAGA AGCAGAAGTT GTCTTCGTAG GTCAGGAAGA CAAGCCTGAA GAAATCAATA CAGAAGAGGT CGAGGAACCT GCTGAGCCTG AACCGGTGGA CAACTCGATG ACCTATGAAG AGTTTCTAGC TGCCAAGGCT GCCTCCTCAA GCGAACTACT CAAACCGACT AAGGAACGAG AAGTTGCAAA CGAGTTCACG AAAGTTGCAG CAAAGGTTTC TGAAGAAGAA GATTTTATGG TTATGGGAAG TGGCAAGGCG AGACGCAACA AGCAGCAGAA TAAGGCAGTG AAGACACTCA CCCCGGCTTT CCGTGTGGAA TCGGGCACCG TAGAGACGGA TGGGCATGGG GGACGAGGAC GCAATGGACG AGGAGAGGGA CGCGGAAGCA GAGGTGGGCG TCGTGAAGGA CGCGGCGGGC GAGGTGAAGG ACCTGGTAGG CGAGGTGAAG GACGTGGCGG GCGAGGTGAA GGACGTGGCG GGCGAGGTGA AGGACGTGAC GGACGGGGTG AAGGACGTAG CGGGCGAGGA CGTGGTCTAA GGGGGTCGGG TCGCGGTGGA GGAAGAGACC AGCAGGTCAA CGTCTTGGAC ACCTCGGCTT TTCCGTCTCT GTAG
|
Protein sequence | MSSNRFAILD DDDTAPAVKK DSKPAKAAVE ASKPDDRRRP NQNDRNTKFG RGGRAPSRDG KRAYDRRSGT GRGKEIKKSG GGARNWGTDK AEAEVVFVGQ EDKPEEINTE EVEEPAEPEP VDNSMTYEEF LAAKAASSSE LLKPTKEREV ANEFTKVAAK VSEEEDFMVM GSGKARRNKQ QNKAVKTLTP AFRVESGTVE TDGHGGRGRN GRGEGRGSRG GRREGRGGRG EGPGRRGEGR GGRGEGRGGR GEGRDGRGEG RSGRGRGLRG SGRGGGRDQQ VNVLDTSAFP SL
|
| |