Gene PHATRDRAFT_40626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40626 
Symbol 
ID7198486 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp488508 
End bp489601 
Gene Length1094 bp 
Protein Length292 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184627 
Protein GI219128872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0127959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACGTA GTCAGGGCAA CCCCAGAGCC TTTATTTAGT TGTACCGAGA TGAGAAAATG 
AAAAGAAGCC GAATGTACCG CAAGCAAGTT CGACTCAACT CATTCATTTT GCGATTTTGC
AGTCTTCAAA TCGTTTTGCC ATCCTGGACG ATGACGATAC CGCTCCAGCC GTGAAGAAGG
ATAGCAAGCC CGCCAAAGCT GCTGTCGAGG CTTCGAAGCC CGATGACCGG TATGTTGATT
TCCTTTTCCC TGCTCAAAAC AATGGCATCT TTCAAAGTCA TATATGACGT CTAAAGATAA
AATGTTCTCC CTCTTTTTGT GACAGTCGCC GTCCAAACCA AAATGACCGC AACACAAAGT
TTGGCCGTGG TGGAAGAGCA CCGTCGCGTG ATGGGAAGAG AGCTTATGAT CGCCGCTCTG
GGACGGGCCG CGGCAAAGAA ATCAAGAAAT CCGGTGGCGG TGCTAGAAAC TGGGGAACTG
ACAAAGCAGA AGCAGAAGTT GTCTTCGTAG GTCAGGAAGA CAAGCCTGAA GAAATCAATA
CAGAAGAGGT CGAGGAACCT GCTGAGCCTG AACCGGTGGA CAACTCGATG ACCTATGAAG
AGTTTCTAGC TGCCAAGGCT GCCTCCTCAA GCGAACTACT CAAACCGACT AAGGAACGAG
AAGTTGCAAA CGAGTTCACG AAAGTTGCAG CAAAGGTTTC TGAAGAAGAA GATTTTATGG
TTATGGGAAG TGGCAAGGCG AGACGCAACA AGCAGCAGAA TAAGGCAGTG AAGACACTCA
CCCCGGCTTT CCGTGTGGAA TCGGGCACCG TAGAGACGGA TGGGCATGGG GGACGAGGAC
GCAATGGACG AGGAGAGGGA CGCGGAAGCA GAGGTGGGCG TCGTGAAGGA CGCGGCGGGC
GAGGTGAAGG ACCTGGTAGG CGAGGTGAAG GACGTGGCGG GCGAGGTGAA GGACGTGGCG
GGCGAGGTGA AGGACGTGAC GGACGGGGTG AAGGACGTAG CGGGCGAGGA CGTGGTCTAA
GGGGGTCGGG TCGCGGTGGA GGAAGAGACC AGCAGGTCAA CGTCTTGGAC ACCTCGGCTT
TTCCGTCTCT GTAG
 
Protein sequence
MSSNRFAILD DDDTAPAVKK DSKPAKAAVE ASKPDDRRRP NQNDRNTKFG RGGRAPSRDG 
KRAYDRRSGT GRGKEIKKSG GGARNWGTDK AEAEVVFVGQ EDKPEEINTE EVEEPAEPEP
VDNSMTYEEF LAAKAASSSE LLKPTKEREV ANEFTKVAAK VSEEEDFMVM GSGKARRNKQ
QNKAVKTLTP AFRVESGTVE TDGHGGRGRN GRGEGRGSRG GRREGRGGRG EGPGRRGEGR
GGRGEGRGGR GEGRDGRGEG RSGRGRGLRG SGRGGGRDQQ VNVLDTSAFP SL