Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40517 |
Symbol | |
ID | 7198434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 135230 |
End bp | 136735 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184492 |
Protein GI | 219128590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.299005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCCTG TACACCAACG GCGGCATTCG CAGTACAACG GTCGTGCTCC TTCCCCACCG GAACCTTCCG GCTCCGACAG CGTCATTGAA TTATCCAATT TCAACGGAAC AACCCATACG CACGGTACCA GTACTGTAAC GGCGACCAAT GCGGTTGCGA AAGCATCCGC CGTCGGATCG AACGTTGACG AATCCGATTA CGAGATTCGT GCACTCGTGG GTGACCAAGC CTTGCCGGAC GGAGCGTCAC CCGCGCGTCA CCACGGGGAT GGGCACGGAC TCGCGGTAGG GACGGCCTCC AACGCCCAAG TCGCCGTTAA CATTGTCATT TCCTTCGTCG GGGCCGGACT GCTCGGCATT CCCGACGCCT TTCGACGGGC CGGGTGGCTC CTCGGGACGC TCACGCTCGC CACCGTGTCC GCCCTCAACG TCTACGCCAT GCTGCTACTC CCACACGTCA AACGCAAACT ATTGCATCTT CGACAAAAGC AACAACAGAA CTCGACACGT TCCGACGAAA CACACACCGA CACTCACGAA CTTTTGTTGT TGGACAGTTA TGGTGCCCTG GGCCGGGCCA TTATGGGACC CAATGGTGAA ACCTTCGTCA ACGGCTGTTT GGTGGTTTCA CAAGTCGGTT TCGCAACGGC CTACATTATT TTCATTGCTG CTAATTTGCA CAGTTTGGCC GGTATACCTC GTGGCGTCAC CTGTCTCGCC TGTGTTCCGG GGTTGTGTGG ACTCGTCCAG GCCCGGGACA TGAAAACACT CGCGCCATTT TCGCTACTGG CCGATGCTGC CAACGTACTC GGACTCTCCG CCGTTTTGTT TGAAGACTGG GAGACCTACT ACCAACCACA CGACGATGTT ATACACAAAG TACGATGGTC CGGATTTTTG TACGTGATTG CCATTACCGT TTATTCCATG GAAGGCGTCG GATTGATTCT GTCCTTGGAA ACTTCCAGTC GGCAACCCCA GAGCTTTCCT AGCCTTTTTC GGACCGTCTT GACCTGTATT ACACTGTTTA TGAGTTTGTT CGGCACGGCC GGTTACATGG GCTTTGGCGA AAATACTCAG GCGCCCATCA CCTTGAACCT TACCGACAGT AACGTCGCGC TCCTCGTCAA GAGCGCCCTG TGCTTGGCAC TCTACTTGAC CTACCCCGTC ATGATGTTTC CCGTTTGGAA CATTACCGAA ACGATTCTAT TGTCCACCCG CGACCACACC GTCACCCGCG TGGCCTTTCG CAGTGCCCTG GTCGTGCTTA CCGCCATGGT GGCCTGGCTG GTGCCTGATT TCGGCGCCTT TTTGAGCTTG GTCGGTAGCA GCATCTGTAC CGTGCTCGGA TTCATTCTTC CCTGCTGGTT TCACTGGAAA GTCATGGGCA ACGAACTTCC CAACTGGCAG GTGGGCCTGG ACCTTTTCCT GATGGTTGGC GGAGGCGTGT TTGGAGTGCT CGGAACCTAC CAAAGTATTA CAAGTTTGGG TGGTGGTGGT CAATAA
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Protein sequence | MLPVHQRRHS QYNGRAPSPP EPSGSDSVIE LSNFNGTTHT HGTSTVTATN AVAKASAVGS NVDESDYEIR ALVGDQALPD GASPARHHGD GHGLAVGTAS NAQVAVNIVI SFVGAGLLGI PDAFRRAGWL LGTLTLATVS ALNVYAMLLL PHVKRKLLHL RQKQQQNSTR SDETHTDTHE LLLLDSYGAL GRAIMGPNGE TFVNGCLVVS QVGFATAYII FIAANLHSLA GIPRGVTCLA CVPGLCGLVQ ARDMKTLAPF SLLADAANVL GLSAVLFEDW ETYYQPHDDV IHKVRWSGFL YVIAITVYSM EGVGLILSLE TSSRQPQSFP SLFRTVLTCI TLFMSLFGTA GYMGFGENTQ APITLNLTDS NVALLVKSAL CLALYLTYPV MMFPVWNITE TILLSTRDHT VTRVAFRSAL VVLTAMVAWL VPDFGAFLSL VGSSICTVLG FILPCWFHWK VMGNELPNWQ VGLDLFLMVG GGVFGVLGTY QSITSLGGGG Q
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