Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40338 |
Symbol | |
ID | 7198207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 150864 |
End bp | 151520 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184406 |
Protein GI | 219128409 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00203179 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCGC AATTGATATG GCAGCGTTGG GAAAAGCGAG CGTTGTACGT CACCGATGAG CTCCAGAAGG CGAAAAACGT GGAGGCAAAA GACCGCGCTC GCCGTACGAA TGAACGCAGC CAGCTGTTGA AAGTCCTGGG GGGTCGTCAA TCGGAGTGGC GAACGAAACG ATTGGGATTT CAGTCGAGCC AGGCACCATC TCTTGCGGTG TACAGAGAAA TATGCAAGAC TGTCTTCGTC GAAGCAGGTA TATTTGTACC CGCATTTGCG CAGAATCAAC AGGCACACTT GTGTCGACAC ATCCATTGGA TGACGGCAGA AGACAACCAG TTAACGTATC TGAAACGAGA CTGTCTCGAC TTGGCCCATT CGTTGGAAAA GACTGTCCGA ATTCTTCGAG AGGAGTGCAC AGAGATTGAG ATTCGCTACT TGAATCGAAT ATTTCTGATT GAGCGGGAAA TTCGTGAATT GCAGTCGAAG CTCAGCGAGT ACCCGTTGAT TGACGCGTCT CGGTACGGTT GTGACAAGAG AGAGTGTGAC CGCGCTGCTC CCGCCTGTGT GCATTCGGGC GTAACACTCG AGACTTTGAG TCTCCACGGT AGCAGCTGTT CGTCGTTGCG TACGGATATG TCGTCCAGCG ACGAGGACTC GGATTGA
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Protein sequence | MASQLIWQRW EKRALYVTDE LQKAKNVEAK DRARRTNERS QLLKVLGGRQ SEWRTKRLGF QSSQAPSLAV YREICKTVFV EAGIFVPAFA QNQQAHLCRH IHWMTAEDNQ LTYLKRDCLD LAHSLEKTVR ILREECTEIE IRYLNRIFLI EREIRELQSK LSEYPLIDAS RYGCDKRECD RAAPACVHSG VTLETLSLHG SSCSSLRTDM SSSDEDSD
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