Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39906 |
Symbol | |
ID | 7195702 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 334960 |
End bp | 336238 |
Gene Length | 1279 bp |
Protein Length | 403 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183970 |
Protein GI | 219127496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAT CTTTTCTACC CTTCAGCTCG AACAGCTTTG CTATCCTTGC AACCACGCCA ACGGTGAAAG TTGGTCAAGA GCAGGGCAGC TACAAATCGA TAAAGATTGT TCCTGGCAAG AACGATATTC TGCTTGGTAG AGGTACGCGT CTAGGAGGTT CAGGCGCGAC TAGCTCCTTT GGAGAGATAT CTTACTTAAC CGCTGCGAGT CCCTCAAACC CATCGTCTCG CATTGTCTAC AGGGGGCAAG AACAACCAGC ACTCGGGGAA TGTTCAGCTT CGAAATTTGG CTCGATCTTT CTGTTCCGTC TACCACGGCG CCAAAAAAAA AGAAAAGCCG GCCATTGCTC AAAGTTTGGT TGGCTGTGTC CGCAACTTGA GCCCGCCTGG CCGTTTCCTA AAGCATACTG TAGAAGGATG GGAGGAGGCC ACAGAGTCCG TTGCTCAAGA AAAGGCCAGT CAAAGCCTTC GGGACACCGT GGCATCAGTC CTTAAGGAAG CAGCAATTCA GGATGGCACA GAGCTACCAA CCGAGATCTT CACCCAAGCC TGCCTCAAAG GCCCATGTCC CGTTTCAAGC CGTCGGCATG CAACTGCAAA AACACCCATA TCAATGCACC TTCAACAATC TAATGAGCAG CTGACCCAGA ACGACTCCGC TTCATTGTTT ACAACTGCAT TTTCGAGCCA TACTTCCATA TCCGATAGTC CAGCGGTTCA CTATGGCAAC CGACTACTTC CGCCCATTGA CGTCACCTTG TCCGCTTTCT CCCTAGAAAG TTCCGTGGGC AAGCAAAGAA AAATTTCTTT TCCAGGCAGA AATCCCAACA CTGTGAACCA ACACTCGCAG ACAAAACGAG CGCGATATAC AGCAGCAGAG ACGGGGAATT ATACTTTTGA ATGGGGCCTA ATCCCTAAGC TCCAGAGCAT GTCTTCGGAT GGGTTTTATA TGTCATGCCA CGGATTGCCT AAATTACTAT CCGGAATTGG AACTGGGAAC GGCGGCATCA GTCTCAATGA TGTAGCGCAA TACGCTCATC TTGCCACTCA ACGGGAGAAA AACAGCAATA TGAGTGAGTT CAGCGTAAGC GACAATTTTG AAGAGGGCAA ACCCATTGGT GCTGATGCGC TTGACGCTAT TGTTTGGGAT GAAGACGACA TTGATCTTGA CAGCTCCTCT TCTTTTCCAA TAGCTCCGAG TCAACATCAG GAGGGGGCCT CTTGGGATGA TGAGGACGCA TTTCGTCGCA ACATCTTGAG TCTTCTACAA GAAATTTAA
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Protein sequence | MNLSFLPFSS NSFAILATTP TVKVGQEQGS YKSIKIVPGK NDILLGRVPQ THRLALSTGG KNNQHSGNVQ LRNLARSFCS VYHGAKKKEK PAIAQSLVGC VRNLSPPGRF LKHTVEGWEE ATESVAQEKA SQSLRDTVAS VLKEAAIQDG TELPTEIFTQ ACLKGPCPVS SRRHATAKTP ISMHLQQSNE QLTQNDSASL FTTAFSSHTS ISDSPAVHYG NRLLPPIDVT LSAFSLESSV GKQRKISFPG RNPNTVNQHS QTKRARYTAA ETGNYTFEWG LIPKLQSMSS DGFYMSCHGL PKLLSGIGTG NGGISLNDVA QYAHLATQRE KNSNMSEFSV SDNFEEGKPI GADALDAIVW DEDDIDLDSS SSFPIAPSQH QEGASWDDED AFRRNILSLL QEI
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