| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39681 |
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| Symbol | HAD2 |
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| ID | 7195423 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 435277 |
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| End bp | 436359 |
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| Gene Length | 1083 bp |
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| Protein Length | 329 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-coenzyme A dehydrogenase |
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| Protein accession | XP_002183747 |
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| Protein GI | 219127029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.235436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATGC CAACCATCTC ACGCATCGCG ACTCGCGCTT GCAAAGGTCC ATTGGGTCGT
GGACGACTCG AAGAATCGGG ATGGCGATCT TTTTCGGCAT CTTCTTCCTT CGACAAACTT
GGGGTAATTG GTCTCGGTTT GATGGGGCAC GGTGTTTGTC AAGTTGTACG TATACAGAAG
AAAGGAAGCG GTTGCGGAAG ACACCAGTAA GGCTATTGGC GCTGGCTCTG ACTCCTTTTG
ACACGTTTTG AAACTCAGGG TGCCGCTTCA GGAATCCATT CCGAAGTCAT TGCGTTCGAG
CCCGAACAGC AGTACCTCGA CCGCGGAAAA GATCGTATCG AAAAATCCAT CGCCAAGCTT
GTTTCCAAGG GGAAAATGAC GCAAGAAGCA GCCGATGAGA CTTTGGGGAA AATCACCTTT
ACGACCGACA TGGCTCAGCT CATGGATACC GACTTTATCG TGGAAGCCGT CATTGAAAAC
ATCAATTTGA AACGAGACCT GTACTCGGAA TTGGGACAAG TCTGCAAACC AGAAACTATC
TTTGCTTCCA ACACGTCTAG TCTGTCCATA TCCGAAATGG CTGGTTTTTC TGGTCGCCCC
CAGAACTTTG TGGGAGTCCA TTTCTTCAAT CCCGTCCAGC TCATGAAACT GGTGGAAGTC
ATCCACACCG ACCAGACCGA TCCGGCCGTT TTCGACAAGG CCTACCAATG GGTCCAAGAC
ATTGGCAAGG TGCCGGTCTC GTGTGGCGAC ACTCCCGGTT TCATTGTCAA CCGTCTGTTG
GTACCCGCCT TGATGCAGGC CATGCTCATG GTGGATCGAG GCGAGGCGTC GGTGCGAGAC
ATTGACGTGT CTATGCAACT GGGCGCCGGT CACCCGATGG GACCCTTGCA CTTGGCCGAC
TATATTGGCC TCGATACGTG TTGCTTTATC GTCAAGGGAT GGGTCGAACT CTTTCCGGAC
GAACCGGCCT TTGTTCTGCC TAAAATTCTG CAGACCAAAG TGGCCGCGGG CGAACTGGGA
CGGAAAACGG GCAAAGGATT TTATCACTGG GACGGTGACA AGAGAGGAGA TCCGGTGGAG
TAA
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| Protein sequence | MHMPTISRIA TRACKGPLGR GRLEESGWRS FSASSSFDKL GVIGLGLMGH GVCQVGAASG
IHSEVIAFEP EQQYLDRGKD RIEKSIAKLV SKGKMTQEAA DETLGKITFT TDMAQLMDTD
FIVEAVIENI NLKRDLYSEL GQVCKPETIF ASNTSSLSIS EMAGFSGRPQ NFVGVHFFNP
VQLMKLVEVI HTDQTDPAVF DKAYQWVQDI GKVPVSCGDT PGFIVNRLLV PALMQAMLMV
DRGEASVRDI DVSMQLGAGH PMGPLHLADY IGLDTCCFIV KGWVELFPDE PAFVLPKILQ
TKVAAGELGR KTGKGFYHWD GDKRGDPVE
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