Gene PHATRDRAFT_38884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38884 
Symbol 
ID7203612 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand+ 
Start bp451263 
End bp452007 
Gene Length745 bp 
Protein Length191 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182839 
Protein GI219125127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATGC GAAGTCGATG GTTGGCCTCC ACTTTGATGA CTCTCTCACC GCTATCCTGC 
ACGAATGCAG CAGCCCCGTT CGTATCGCGT CTTCTGATTG CAGCGCAGCA GAGTTCAAAG 
CCAGCCGGTA AGACATCTTT GACATCGTCA ACTGTAGCCC GGTCCTTTTC GGTTCGAGGC 
GGCGCCGGTA CAGAGGTTAC AGCTTACACA ACTCTAGCGG ATCCTGCTCC TGGAAGTCCT 
TTTCACTACG CCTTTCCTGT GCATAACCTG GAAGCAGCCA AGGACTTTTA CGAAAATGTG 
TTGGGCTGTG TCGAAGGCCG TTCAAGTGAA AAGTGGCAGG ACTACTCGTT GCACGGGCAT 
CAAATTGTCG CCCACTGGGC CGGGAACGAT TATCGCTGTC AAGACTACTA CAATCCGGTG 
GATGGGGATG AGGTCCCTGT TCCTCATGTG GGGCTTGCTT TGACTGTAGA ACAGTTCCAC 
GAATTGGCTG AGCGAGTCCG GAGCAAGGGC GTCAATTTCA TTATTGAGCC ACATCTTCGA 
TTCAAGGTAA GAGGAGGCAA TGGTCAACTT ATAAACATGC TGGTTAAAGA AAAAGGAAAA 
TTTTCTTATA CGTTTTGCAT TACAGGGAAT GCCGGGCGAA CAGTATACTA TGTTCTTCAA 
GGATCCGTCA GGAAACAACC TTGAGTTCAA AGCCATGACT CATCCTGAAA ATCTCTTTGC 
GAAATACAAC GTTACGAATA AGTAA
 
Protein sequence
MVMRSRWLAS TLMTLSPLSC TNAAAPFVSR LLIAAQQSSK PAADPAPGSP FHYAFPVHNL 
EAAKDFYENV LGCVEGRSSE KWQDYSLHGH QIVAHWAGND YRCQDYYNPV DGDEVPVPHV 
GLALTVEQFH ELAERVRSKG VNFIIEPHLR FKGMPGEQYT MFFKDPSGNN LEFKAMTHPE 
NLFAKYNVTN K