Gene PHATRDRAFT_38754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38754 
Symbol 
ID7203794 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand+ 
Start bp127526 
End bp128204 
Gene Length679 bp 
Protein Length195 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182776 
Protein GI219124996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCAT TCGGTGCCAA AGCCACAGGG ACGGCCTGTA TCATGGCCAC GTTACTGGCA 
GTCCGGGCCG CGAAGAAGCG TACACTGACC ACCACCGGAG CCGTCACGGG CTTCGTTGTT 
GGCTTTCTTT TAGTCGCCAC TGGCCTACGA GGACTGACGC TCTTTTTCTT TTATCAGCTA 
GGCTCCTGGG CTACCAAGTA CAAAACGATA CGAAAGCAGC AGTTGGATGC GACCGCGTCG 
GATTCGGCCG TTCGCGGACC CACACAGGTG CTTGCGGTTA GCCTTGTGGC CGTACTACTC 
TCTCTGATGC ATGCGTACAT CTGCGGGGCG GAACGGGCTA TCGTGTTCCA CGTCAATAGT 
AGAAACGACA ACGACTTTAT CACCAATTTA AGCAGTCATC TTACCTTGGC CGTTCTCGCT 
CACCACGCTA CGTCGTTGGC AGATACCTTG GCGAGTGAGC TTGGGATCCT TTCCAAGGCA 
CCCCCTTTTC TGGTCACTCA ACCGTGGCGA AGCGTGCCGC CTGGCACAAA CGGAGGGGTA 
ACCTGGATGG GAACGATTTG GAGTGTGGTC GGTGGAGCCT TGTGCGGCTT ATTTACCTCA 
GCAATGGATT TTCTATCGGG AATGTCGCCG TTGAATGCTC TCAGATTGAC GCTGTTTGGT 
AGTCTATGTG GAATACTAG
 
Protein sequence
MDPFGAKATG TACIMATLLA VRAAKKRTLT TTGAVTGFVV GFLLVATGLR GLTLFFFYQL 
GSWATKYKTI RKQQLDATAS DSAVRGPTQV LAVSLVAVLL SLMHAYICGA ERAIVFHVNS 
RNDNDFITNL SSHLTLAVLA HHATSLADTL ASELGILSKA PPFLVTQPWR SVPPGTNGGV 
TWMGTIWSVV VYVEY