Gene PHATRDRAFT_38736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38736 
Symbol 
ID7203786 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp86980 
End bp88179 
Gene Length1200 bp 
Protein Length361 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182768 
Protein GI219124979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATTA TGAGCTCGTG GAGCGGGCAC CGCTTCTTTG GATTCGGGGT AACAGTTAAG 
CCTTTCTGCT CTGCCACGGG CGCTCTGGGT CGCCAACTTC GAGTACCCCG ATCTATGCTG
CAGGTGGAAA TCGATGCAGA GTGTCTGTCG TCCGTCCAAT GACCCACTTC GAAGATGGCA
TAGGAATCAG GCCTGATAGT TACATTTACT GTTACTGTTA CTGTTACCGT TAGTTAGTTT
TTTACTGTCA GCACAACGTC CGTCCAACAA CGGGACCTCT TTGGGTTCAG ACATTGGCAC
TTCTCGTGTT ACGTCAGTCT CGAGACCATG GTCCCACTGG TTTCGTCGAT CCGTCGTTAT
GGCGGGCGAT GCATGCCCTA CATCTTTCTG GTTCCCAAGG AGGTTGCATG CACCATCGGT
TTCTTTGGAA CGCACGGCTT GATCATGAGA CTCTTTAATG CCATTTTAAT GCTGTGTGTA
TTAGCGGACA CATCGAGTTG TTTCGTGGCT TTTACTTCAG TCGCTGCACC AGAACGCCGT
GTTCCTTCCG CCTTGTCGCT ACACAAATCG GTGGAGACTC CTGAATCTGC AGCGGAAAAA
TCGATGGTCT TTCAACACCA AACTATCACG CGCAAAGGAA TGCTCGTTCG TTCCACTGCT
GTATTATCGT CGATACTATC CAACCCTTTT ACAGCCAACG CTGACACTCC TACCAGCATT
CAGTCGTGTC CCAAGGGCAC AGGAAATTCC AAAGTCAATT GTGCTTCGAC GGCCGCCGTG
CGTCAAGTCG ACAACTATAT CGAGCCGTGG ACGTACCCGT CATCCATGCC CGTAAATGAG
GTTATTGCTC GCCTCAAAGG AGCCGTCAGT ACAGATATAC ACAATACGAT CGTCGAACAA
AACGAAACTT ATCTCAAAGT AGAGGCCGTC CGCAATTTTT CTACCGATAT GGTAGAGTTC
CTAGTAAATC CAGAAGATCA CATTGTCACA TTCATTTCCC GACAGACGGA TGGTCCGGAT
TTTGGAGACT TTGGCGCTAA TAGGAAGCGA TTAAACGAGA TTCGCAGAAA AGCCCGCGTC
TTTGACGTCA TGGGTGGGCA AGGGTACGCC CGTGAATCCG CGCTTGGCCA GCTCAAAGCG
TTCTACGGAT TACAAAGTGG CGCCGGCTTT GAAGACGTCA TTCTTGACTT GGACAACTAA
 
Protein sequence
MVIMSSWSGH RFFGFGVTVK PFCSATGALG RQLRVPRSML QFFTVSTTSV QQRDLFGFRH 
WHFSCYVSLE TMVPLVSSIR RYGGRCMPYI FLVPKEVACT IGFFGTHGLI MRLFNAILML
CVLADTSSCF VAFTSVAAPE RRVPSALSLH KSVETPESAA EKSMVFQHQT ITRKGMLVRS
TAVLSSILSN PFTANADTPT SIQSCPKGTG NSKVNCASTA AVRQVDNYIE PWTYPSSMPV
NEVIARLKGA VSTDIHNTIV EQNETYLKVE AVRNFSTDMV EFLVNPEDHI VTFISRQTDG
PDFGDFGANR KRLNEIRRKA RVFDVMGGQG YARESALGQL KAFYGLQSGA GFEDVILDLD
N