| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38668 |
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| Symbol | |
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| ID | 7203360 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 653307 |
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| End bp | 655304 |
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| Gene Length | 1998 bp |
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| Protein Length | 626 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182730 |
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| Protein GI | 219124897 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0793283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCATC AGCAACTACA GGGAGAAACT CCGTTTTCAT TTCCCGCCTT GGATGGGGAA
ACAAGAATTG ATCTCGGCGC GTACCAAAGA CTAATCGTGA CGAATTTGGA CGTCAATGAG
GCAGGCCGGG CTTATTTTAA CTTAGGTCTA CGGCTCATGC TTTCATACCA GCACGAAATG
GCCTCCAAGT GTTTCCTGGC ATCACTAGAA AACAGCCCAG ACTGTGCTTT GGCCCACGGT
CTTTTGGCAC TATGTCATTC GCCGAACTAC AACTTTAAGG GTGAAGCCTA CTACGAGTCA
GCCTGTCACT ATGAAGACAC AGACAAGCCT GATCTGCTCT GCGTCTTTCC TTCTCAGCAA
GTCGCCGATC GACACAGTCG AATGGCTGTG GAGAAAATTG AGGAGTTGCG CAAGGCACAC
CGTAAACGCA AGGGGAAAAA GAAACAGAGG ACGGTTCCTT CCAATAACGG CGAAAAGCTA
CCTTCTGTAA TATCGGATGT AGAATGTCAG TGGCTTGCGG CGATTCGTGT ATTGACGAGT
TCTCCGGGTG TCGACCCAGA CTTGAGCCAC GATATTGTCG GTCGACCCTA CTCCGACGCC
ATGCGAAAAG TATACGAAAA GTTCGACAAC GATCCAGAAA TCGCCTACGG TTTCGCGGAG
TCATTGATGG TTTTGAATGC CTGGCAGCTA TACGAGTATC CATGTGAGTC ATATGCGCAG
TCTAAGCGAT TGTGATAACT ACGCGTCGGT TCTTCGCCGT TACATACATT TGGAAATAAT
GTCACTCACA ATGCTACTGG TTTCTTGGTT GGTTTCTCAG CCGGCAAGCC GCTCAGCCCG
GATGTAGTGG AAACCCGAGC TGTGCTGGAG CGTTCGCTAA AAATTCATCC GCATCACGCC
GGTCTGTGCC ACATGTACGT GCACCTTTCC GAAATGTCAG CGCATCCCGA AAAGGCCTTG
GCTGCCTGTC AGCCGCTCCG CGGAGAATTC CCCCATGCTG GACATCTGGT GCACATGGCA
ACGCACATCG ACGTCTTGCT GGGTGACTAC GAGTCCTGTG TGCACTTCAA CTGTCAAGCC
ATCCGGGCCG ATCGACATGT CATGGCGAGT AGTCCGGCAA CGGCTGGTAA GGAAAGTTTT
TACTTTGGAT ACATTGTACA CAATTATCAC ATGGCCGTAT ATGGGGCCAT TCTCGGAGGG
ATGCAAGGGA AAGCTATGGA ATTGGCGGAC GAGTTGAACG AACTTATCAA CGAAGATATG
TTCCGAGAGT TTCCCGATTT GACGTCATAT TTGGAAAGCT ATGCAGCTCT GGAAGTGCAC
ATTATGGTTC GTTTTGGGCG CTGGAAGGAG ATCTTGGAGT TAGAATTGCC GAAGGATCAG
CGCCTGATGT TGTTTCGGGC CTGTACTCTG CGGTACGCCC GAGGCTTGGC GCTAGCTGCT
CTAGGCCGCG TCGAGGAAGC CAACAAGGAG ATGATGACGT TGGATGCGTT GCGGGTTGAT
CCCGAAGCGA CGATGCGAAT TTTGCACAAC AATACCATTT TTGATTTGCT CGCGGTAGAT
TCTGTAATGC TGCACGGGGA AATTGCCTAT CGAGAAGGAC AATACGAAAA GGCGTTTGCA
CTGTTGCGGC AGTCCGTACA AATGCAGGAT GACTTGGTGT TTGACGAACC GTGGGGTAAG
ATGCAACCAA TTCGCCATGC CTTGGGTGGA TTATTATTGG AACAGGGACT CTTGGAAGAG
GCTATAGCGG TGTTTCGAAA AGATTTACAT TTTCATCCCA AGAATCCTTG GGCCTTGGTT
GGTTTGATTG AATGCTTGAA ATGTCAACAG CCATGTTGCT GCGAAGCGAC CGATCGAAAT
GCCGAGATTG CTATGCTGCA ATCACAGCTT GCAATATGTC GCAGTGGTGA GCTGGCTGAT
TTTGATATAG AAGTACCGTG CGAGTGCTGT CAACGTTCAC CGGGGCAAAA TACAAACGAA
ACGCAAATCT TGGAATAG
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| Protein sequence | MRHQQLQGET PFSFPALDGE TRIDLGAYQR LIVTNLDVNE AGRAYFNLGL RLMLSYQHEM
ASKCFLASLE NSPDCALAHG LLALCHSPNY NFKGEAYYES ACHYEDTDKP DLLCVFPSQQ
VADRHSRMAV EKIEELRKAH RKRKGKKKQR TVPSNNGEKL PSVISDVECQ WLAAIRVLTS
SPGVDPDLSH DIVGRPYSDA MRKVYEKFDN DPEIAYGFAE SLMVLNAWQL YEYPSGKPLS
PDVVETRAVL ERSLKIHPHH AGLCHMYVHL SEMSAHPEKA LAACQPLRGE FPHAGHLVHM
ATHIDVLLGD YESCVHFNCQ AIRADRHVMA SSPATAGKES FYFGYIVHNY HMAVYGAILG
GMQGKAMELA DELNELINED MFREFPDLTS YLESYAALEV HIMVRFGRWK EILELELPKD
QRLMLFRACT LRYARGLALA ALGRVEEANK EMMTLDALRV DPEATMRILH NNTIFDLLAV
DSVMLHGEIA YREGQYEKAF ALLRQSVQMQ DDLVFDEPWG KMQPIRHALG GLLLEQGLLE
EAIAVFRKDL HFHPKNPWAL VGLIECLKCQ QPCCCEATDR NAEIAMLQSQ LAICRSGELA
DFDIEVPCEC CQRSPGQNTN ETQILE
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