Gene PHATRDRAFT_38662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38662 
Symbol 
ID7203357 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp633937 
End bp634903 
Gene Length967 bp 
Protein Length248 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182575 
Protein GI219124574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTGGA ATCTTGTCGT GTTGACGCTT TGTTGTGGCA TGCAGTGGCT TCCATCCCAG 
GCGTTCGTGA TCGTCCGGAG CGGTTCACGA CGCCTCTCCG CCGATACGCC GGCACGGCGT
TCCACGTTGC TGGGAATGGT GTCGGCCGAA CGCCGTTACG AAGCTCGCCA ACTAGTGTCT
GACGGGATGG AGATGTTTCG CAAGGGTGAG GTGTCCAAAT CGATCGACTT GTTTGATCGT
GCCGATGCGC TGCAACCGGA CGGCTCACTC CATCCGTTTC TCTGGCAACG CGGCTTGAGT
CTGTACTACG CCGATCGCTT CGCGGAAGCC AGTGATCAGT TCCGTTCCGA CGTCAAAGTT
AACCCTAACG ATGTGGAGGA AATCGTTTGG GATATTGCGG CGCAATTGCG TCAGCGTCCG
GACGAATTTC CACCGTCCAC AATGATGAGC TTGCCTGCGG GAAATCGGGA TCGCCGGAGA
ATTATGCCCA CCGTCTACCG ACTCTTTCGA GGGGAAGGAA CCGAACACCA ATTGGCAATG
GCTGGTCACG GAAACGGAGC CAGGTACGTC GTGATCTGAT TATTTATAAA AGACGTCCAC
GAGATCCACT GGGCCATTTT CCTATTTACC GTTCGTTGAT ACTGAATTGC GCTCTTTCCT
TGACAACAGC GTTGCCGACG AGTTTTACGC ACTGTTTTAC CTCGGACTCT TTTGTGAAGT
ACGCAAGGAG ACGGTGAAAG CTTCCGAATA CATGCAACAG GCAACTCGTA CCGAGTACGC
GACGGGTATT GGACGAGGCG ATTATATGAC TTCGTGTGCC AGAGTACGTA TATTTATACG
AGGTAGCCTT GGACTCGTGT GCCATGAATC TCGCGATCTT GGGCTGCGCT TACCCGTGCC
CTGCTACTGT TGCCATTTTA TTTTCCGGTT CTCTTAGGTG CACTGCAAAC TTCGAGGGTG
GGTGTAG
 
Protein sequence
MQWNLVVLTL CCGMQWLPSQ AFVIVRSGSR RLSADTPARR STLLGMVSAE RRYEARQLVS 
DGMEMFRKGE VSKSIDLFDR ADALQPDGSL HPFLWQRGLS LYYADRFAEA SDQFRSDVKV
NPNDVEEIVW DIAAQLRQRP DEFPPSTMMS LPAGNRDRRR IMPTVYRLFR GEGTEHQLAM
AGHGNGASVA DEFYALFYLG LFCEVRKETV KASEYMQQAT RTEYATGIGR GDYMTSCARV
HCKLRGWV