Gene PHATRDRAFT_38531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38531 
Symbol 
ID7203292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand+ 
Start bp331594 
End bp332340 
Gene Length747 bp 
Protein Length248 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182513 
Protein GI219124444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0406973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTTC AATACCAACA GGGCGACAAC AGCGAAGAAT GCAACTATCG TGTTGCCATT 
CATCTCAATA ACGTTGGCGT TGCGCTTCTC GAGCGTCGGG CCTACAAGCA AGCCCTCGAC 
ACTCTCAAGG ATGCGGTGAC GGTTGTCCGC CAAGCCTTTG TTGATGAGGA CGACGAGAAT 
CAGAGTTCGA TGTTGACCAA AGCCGCTCGT CGGCTTGCAA CTCCCAAATC GCTTGTTCTC 
GCCTCCTCTG GCCTGGTGAC AATTTCGGAA GATGCCGGAT TCGAGACTAT CAGACCACTG 
ACGCATGCTG GGGGATCAGA TCAAGCTCTT TGTGCTGTGA AGATGGAACA CTTTGGGCAG 
GAAGACCGTG ATATCGATAT CGACTCAGCC ACAGTATTGC ACAACTTTTC CGTCGCGCAC 
CTTCTTTTGG CCCGCGTTGC TAAGACGAAC AGCTGCGCAA AGCAGCTGCG AGTCGGTGCG 
CTCAAATTGG CCAGTCTATC GTACCGAACA CTTTCCACAC TCCTCGTTGT CCGTGATGAG 
AACGAGCTCG AGAACATGAT TATGCTTAAA CCCAATCTAT TTTTGATCGC TATTTCTGTT 
CTGCGGTGTC TTGTTCATGC CCTACACGAG TCGAACCAAG TGATTAAGGC ACAGCAAAGC 
TATCAACGAT TGCTACTCCT GGAAGCTGCC ATTGGTGAAG TTGACGAACC ACCCTGCTTG 
ACTGGGAAAA GCGCTGCTGC TGCATAA
 
Protein sequence
MSLQYQQGDN SEECNYRVAI HLNNVGVALL ERRAYKQALD TLKDAVTVVR QAFVDEDDEN 
QSSMLTKAAR RLATPKSLVL ASSGLVTISE DAGFETIRPL THAGGSDQAL CAVKMEHFGQ 
EDRDIDIDSA TVLHNFSVAH LLLARVAKTN SCAKQLRVGA LKLASLSYRT LSTLLVVRDE 
NELENMIMLK PNLFLIAISV LRCLVHALHE SNQVIKAQQS YQRLLLLEAA IGEVDEPPCL 
TGKSAAAA