| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38064 |
|---|
| Symbol | |
|---|
| ID | 7202747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 788458 |
|---|
| End bp | 789309 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182136 |
|---|
| Protein GI | 219123652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00684271 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC TAGTGACCGC CAAAGACCAA ACACCGTCAC GGCAGACCGG AACTGTCCCC
GACCAGGGTT CCAATCCTTC CCCCGACAAG GAACCAGACG CCGACGACGA AAGCGACGAA
GACGAGTATT CCGATTGGTT ACAATCCGTA CGCACAGAGA CGGGTCTAGA AACGGGTATT
CGAGTGACTT GGCCCGGCGT GGAACCCTTT CTTCTCTCCA CCTGCCTTCC CGCAACCGAA
ATGGCCCCCC TGTTTCACGG GACGCAGTGG GCCGGCACCC GCATTTGGCG GGCTGCCGTA
GTCGCCGTGC AGTATTTGTT GTCGCCAACG CAAGCTCCTT TACTCCTCAC TGACGTCACG
AACGTACTGG AGTTGGGATG CGGCTTGGGA TTGCCGGGGA TGATCCTGCA CGCTCTACGA
CAATCGCCCG TCGTATTGTC CGACAAGGAA TCCTTGTTGA CACAATTGCG CGACAACATT
GCCAACGCCT TTCCCGATCG GGGAAGACTG CTCCAAGCCG AGGCTTTGGA TTGGTCCGAT
GACAGTGTGC ACCAATTGTT GGAGAAGCTT CGCTTGCCGA ACGGCTTTGA TCTGGTCTTG
AATTGCGATT GTGTCTTTGA GTATCTCTAC GGCGACAGCT GGAAGCATCT GGTCACTTGT
CAAGAAGCCC TCTTTCGTGC CAACCCCCAT ACCGTCATGA TTACCAGTGT GGAACGTCGA
CGCGGCGACG GCTTGGCCAA GTACTTGGCT GCCTTGGAAA CGTCGCCCTC GGTGCAGCGC
GTTGTACAAC TCCAACTCGA TTTCAAACAC GCTCCCGAAG TTGAGCTGTA TCGTGTTTAC
GGAAAGCCTT GA
|
|---|
| Protein sequence | MADLVTAKDQ TPSRQTGTVP DQGSNPSPDK EPDADDESDE DEYSDWLQSV RTETGLETGI
RVTWPGVEPF LLSTCLPATE MAPLFHGTQW AGTRIWRAAV VAVQYLLSPT QAPLLLTDVT
NVLELGCGLG LPGMILHALR QSPVVLSDKE SLLTQLRDNI ANAFPDRGRL LQAEALDWSD
DSVHQLLEKL RLPNGFDLVL NCDCVFEYLY GDSWKHLVTC QEALFRANPH TVMITSVERR
RGDGLAKYLA ALETSPSVQR VVQLQLDFKH APEVELYRVY GKP
|
|---|
| |