Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38009 |
Symbol | |
ID | 7202904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 650840 |
End bp | 651532 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 63% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182109 |
Protein GI | 219123597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCTG CCAGTGTCCG TCGTTCTCTG TCCCGAGCAA CGTTCCGTGC GTCGCACGGC GTACGCACAA CCCCGAGTGT ACGCGGAATG GCCGATCTTC CCTACCACAT TGTCGTAGGC ATGCCCGCCT TATCTCCCAC CATGGAGACC GGTGCTCTCG CCGAATGGTA CGTCGCGGAA GGCGATTTCT TCATTGCCGG TGACTCGGTC GCCAAGATTG AAACCGACAA GGCGTCCATC GACTTTGAAG CACAGGATGA CGGATACGTC GCGAAACTCC TGCAACCGGC GGGCGACGGG ACCGATATAT CCGTCAATAC CCCCATTATG ATCACCGTCG AAGAAGAAGG CGACGTGGCC GCCTTTCAAG ACTACGTCGC CCCGGAAGCC GCTCCGACAC CGGCTGCGGC CGAACCCGAA GTCGTTTCCG CCCCGACGCC GGCGGCCGCC CCCACTCCGG AACCCATCGT CCAAGCCCAG CGAGAAGCGG TCGTGGCACC TCCGACTCCC GCACCGACGT CGACGCCACC GCATCCGCCC CCCGTCGCCA CACCGACGTC GTCCGCAGAT ACCGTCACTC CGGCCTGGGG CTTTGCCGCG GCCACCGCAT CCCCCCTCGC CAAGTCCTTG GCGGCCCAAC AAAAGGCTTA CCTGGAGATG TTTGGGACCA CCGGACAACG ACCGTTGTTG TAA
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Protein sequence | MFSASVRRSL SRATFRASHG VRTTPSVRGM ADLPYHIVVG MPALSPTMET GALAEWYVAE GDFFIAGDSV AKIETDKASI DFEAQDDGYV AKLLQPAGDG TDISVNTPIM ITVEEEGDVA AFQDYVAPEA APTPAAAEPE VVSAPTPAAA PTPEPIVQAQ REAVVAPPTP APTSTPPHPP PVATPTSSAD TVTPAWGFAA ATASPLAKSL AAQQKAYLEM FGTTGQRPLL
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