Gene PHATRDRAFT_38009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38009 
Symbol 
ID7202904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp650840 
End bp651532 
Gene Length693 bp 
Protein Length230 aa 
Translation table 
GC content63% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182109 
Protein GI219123597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTG CCAGTGTCCG TCGTTCTCTG TCCCGAGCAA CGTTCCGTGC GTCGCACGGC 
GTACGCACAA CCCCGAGTGT ACGCGGAATG GCCGATCTTC CCTACCACAT TGTCGTAGGC
ATGCCCGCCT TATCTCCCAC CATGGAGACC GGTGCTCTCG CCGAATGGTA CGTCGCGGAA
GGCGATTTCT TCATTGCCGG TGACTCGGTC GCCAAGATTG AAACCGACAA GGCGTCCATC
GACTTTGAAG CACAGGATGA CGGATACGTC GCGAAACTCC TGCAACCGGC GGGCGACGGG
ACCGATATAT CCGTCAATAC CCCCATTATG ATCACCGTCG AAGAAGAAGG CGACGTGGCC
GCCTTTCAAG ACTACGTCGC CCCGGAAGCC GCTCCGACAC CGGCTGCGGC CGAACCCGAA
GTCGTTTCCG CCCCGACGCC GGCGGCCGCC CCCACTCCGG AACCCATCGT CCAAGCCCAG
CGAGAAGCGG TCGTGGCACC TCCGACTCCC GCACCGACGT CGACGCCACC GCATCCGCCC
CCCGTCGCCA CACCGACGTC GTCCGCAGAT ACCGTCACTC CGGCCTGGGG CTTTGCCGCG
GCCACCGCAT CCCCCCTCGC CAAGTCCTTG GCGGCCCAAC AAAAGGCTTA CCTGGAGATG
TTTGGGACCA CCGGACAACG ACCGTTGTTG TAA
 
Protein sequence
MFSASVRRSL SRATFRASHG VRTTPSVRGM ADLPYHIVVG MPALSPTMET GALAEWYVAE 
GDFFIAGDSV AKIETDKASI DFEAQDDGYV AKLLQPAGDG TDISVNTPIM ITVEEEGDVA
AFQDYVAPEA APTPAAAEPE VVSAPTPAAA PTPEPIVQAQ REAVVAPPTP APTSTPPHPP
PVATPTSSAD TVTPAWGFAA ATASPLAKSL AAQQKAYLEM FGTTGQRPLL