Gene PHATRDRAFT_37658 details

Gene Information

• Locus tag: PHATRDRAFT_37658
• ID: 7202565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 630303
• End bp: 630980
• Gene Length: 678 bp
• Protein Length: 225 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002181602
• Protein GI: 219122543

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.275908
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCTC TTCCAAAAAT CAAGCTTACT TACTTCGACA TTGAAGGTGT GGCCGAGGCT 
GTACGTCTCG CCCTGGTGCT GTCGAATACT CCTTTCGAAG ACGATCGTGT CGGGTTCGGC 
GACTGGGGCG AGATGAAGCC CAAGACGCCC TACGGATGCT TGCCCATCAT GAGTGTCGAC 
GACGGTCCTC TCCGGACGCA GTCCATGGCA ATGCTGCGAT GGGTTGGATC TTCCTGTTCG 
GAGACTCTTT ACCCTCGCGA CAAGATCTTT GACATCGAAG AGGCGATCGG TCTCATGGAA 
GATCTCAACA AGAGCTGGTA TCCTGCCTTT GCGATTGGCA TGCGCCCCCA AAACTACGGA 
CGCCCCGAAG GTTTCGGTCA GACCGAAGAA GGAAAGAAGA TTATCAAGGA AATGCGCGAA 
ACTTGGTTCC AGAACGAGCT TCCCCGCTTT TTGACCTACA TCGAGAACAA ACTCGAAGGA 
AACCAGTGGC TGGCGGGCGG TGAAACCCCG ACGATTGCGG ATTGCGTGGC GGTGCCTATT 
CTTCGCAATT TTTCTCGTGG TCATGTGGAT CATGTCCCAG CCACTGCCTT GGATAGCCAT 
CCCAAGGTTG TGGACTACAT CAAGCGCTTC TGTGCTCAAC CCCAGCTCAA AGGTCGCTAC 
AACAACGGCA TCCATTAA 

 

Protein sequence

MTPLPKIKLT YFDIEGVAEA VRLALVLSNT PFEDDRVGFG DWGEMKPKTP YGCLPIMSVD 
DGPLRTQSMA MLRWVGSSCS ETLYPRDKIF DIEEAIGLME DLNKSWYPAF AIGMRPQNYG 
RPEGFGQTEE GKKIIKEMRE TWFQNELPRF LTYIENKLEG NQWLAGGETP TIADCVAVPI 
LRNFSRGHVD HVPATALDSH PKVVDYIKRF CAQPQLKGRY NNGIH