Gene PHATRDRAFT_37266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37266 
Symbol 
ID7202039 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp554915 
End bp555509 
Gene Length595 bp 
Protein Length172 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181401 
Protein GI219122121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA TCGGTGGTGT TTTGTCTACT TTATTGATCG ATGAAGGCTC GTGGCCCCGA 
GGGAGCATTG TATTTTTGGA TGGCGACTTG GGTGCCGGAA AAACAGCCTT TGCCCGTGGT
TTTGTTCGCG CGGCGATTGG CGATCCAGTC CTTCGTGTGA CCTCCCCAAC CTACTTACTA
TCGAATACCT ACGCACTGCG CCGAGGATAC GAGTAAGTAT AGCTTTTGAC TTGCTATGGA
TTAGGGAGTG GCACGCAGCG CTTTGCAACT CACGTTTTCT CTCAACAGGA TTCACCACAT
GGATCTCTAC CGTTTGTCTG AAAATCCCGA GGACTTAATG CCGCTCAACT TGGATCAAGC
TTTATCCAAT GGCATCTCGT TAATTGAGTG GCCAATACGA TTAGGAAGAG ATAAAATTCC
TCCACAGCGA TTGGAAGTGC ACATTACAAT TCCAAGCGAA TACACTGTGG AAGATGTGGA
TACCGAAGAC AAACTACGTC ACCTGACGAT GACGCCGTAC GGAAGCATTT GGGAGGAGAG
ACTGCAAAGA CTACTGGCGA GCGGATACGT CGATGACTTG ATCCTGGAAC CATAA
 
Protein sequence
MEDIGGVLST LLIDEGSWPR GSIVFLDGDL GAGKTAFARG FVRAAIGDPV LRVTSPTYLL 
SNTYALRRGY EIHHMDLYRL SENPEDLMPL NLDQALSNGI SLIEWPIRLG RDKIPPQRLE
VHITIPSEYT VEDVDTEDKL RHLTMTPYGS IWEERLQRLL ASGYVDDLIL EP