Gene PHATRDRAFT_37243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37243 
Symbol 
ID7202029 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp501002 
End bp502088 
Gene Length1087 bp 
Protein Length332 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181388 
Protein GI219122093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.533431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCCA GTAATTATAA TGGTGGCGGT CTGCGCTGCG GCTTTTGCAG ATGTCTCATC 
GGATTTCTCG CGCTGACTGG AATTGGCATC TTCCTGGCAG TCCACTTGAC GGACGCTAAC
ACCCCGGCAG ATCTGATACC CAACAACTTT AAACCTTCCG ACTTCATTCC GAACTGGGAA
GAATTCTTTC ATGAAGATCC GTTCAACGCG ACAGGCCCAG ACGACGCCCC GCGATGGCGA
AACAGTGGCA ACGGACTCAA CCTCGAAATT GTCAACGCTC TCGACGAGCG CTGGAATGTC
TATTTCGACC GCGCAGTTCA AGAGTGGGAT GCCGGGAATC CGGATGTTCT AGACCTGACG
ACGTCCGCCA GCTCCGTTGA TTCCAGTTGT CAAGCAGTTG AAGGTGTCAT GAAGGTTTGT
AACGGAAACT ACGGCGACAC GCGCTGGAAA GGTATCAATG AGGTCATTAT TGAAAATGGT
GTTCGCATAA TTTCGAGTAC GGCTAAAATG AATGAGTTTT ACTTGTCCGG TGGTAACGAC
GCACAGAAAC AATACACGAT GTGTAAGTTA AGGGCGGGTT GGCTTTCTGT TGTTCCTTCT
TTATTCCAGT CGTCCTCACT TTTGCATTGA GTTTGGTCCA TATTGGTTAG GTCACGAAAT
CGGGCACGGC TTTGGATTGC CTCATACTGA CGAAAATTTC AACAACGCCA ATACAGGAGA
ATGCATGGAC TATACATCTC AGCCCGAAGC AAATATGCAA CCCGGAGAGG CCAATTTCTT
GTTTTTGCAA GAAATGTATG GAACACAAAC CGGCGGGAAT ACGGTAGCTA GTGCTTCAGA
AGTGCCAACC GATCGACGCA TCCCTGCACT CCGCGGTAGC GCCACTATTA GTTGGTTTGA
GGATGTTGTT CTGTCGGTCT GGGACGACCT TATACCCAAA ATAGAGGGTA GAGTTGACGA
GCGAGAGCAT GAGGATGGAT GGCAGCTAGT CCACCGATCA CTGCATGGCA GTGCTCACGA
AATGTATTTG GGAAAGGGGC TGGTAGTTCG TGTTCATAAA CTATTCTCGA GCGAGCGTTT
GGAGTAG
 
Protein sequence
MGASNYNGGG LRCGFCRCLI GFLALTGIGI FLAVHLTDAN TPADLIPNNF KPSDFIPNWE 
EFFHEDPFNA TGPDDAPRWR NSGNGLNLEI VNALDERWNV YFDRAVQEWD AGNPDVLDLT
TSASSVDSSC QAVEGVMKVC NGNYGDTRWK GINEVIIENG VRIISSTAKM NEFYLSGGND
AQKQYTMCHE IGHGFGLPHT DENFNNANTG ECMDYTSQPE ANMQPGEANF LFLQEMYGTQ
TGGNTVASAS EVPTDRRIPA LRGSATISWF EDVVLSVWDD LIPKIEGRVD EREHEDGWQL
VHRSLHGSAH EMYLGKGLVV RVHKLFSSER LE