Gene PHATRDRAFT_37228 details

Gene Information

• Locus tag: PHATRDRAFT_37228
• ID: 7202181
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 456098
• End bp: 458240
• Gene Length: 2143 bp
• Protein Length: 567 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181380
• Protein GI: 219122077

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0446526
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAGA CGGTGCGTGT GTCATCCGTC GCTACTTTCC TTTGTCTGTG CAACTATGGA 
AGCCATTTGT TGGTTCTAGT AACATGTAAA GGATAACTAC TCTAAGAGTT TCTCCGTGCA 
GTCGTGTGAC GATACATATC AGTGAGAATT CCGCAGGCAA TACTGCGGGA GCTCTTTTCC 
CACTTCTGGT TGGTAATCAC CGATTGGAAA AGAGCATCTC GTAGGGCACT AACAGGCCAA 
CAATTGTTCT AGGCATAGCA TACTTTTATT AGCTTATGAG ACAAACTTTG TTCATTCTTT 
ATGAGTAACA GATCCCACAG AAACATGGAA CCTTTGATCA TTATCTCGTC GGTTTGTCGG 
ATGCCAAAGC AGCTTTGTTT GCTGAAGCCG GTATCACCGA TTGGACTACC ATTGCGTCGT 
TGGACCTTCC TGCATTCACA CAAGTGTTGG GAGACCAGGT TGGGACACTG CCAAAGCGAT 
ACAAACTGAA GCGTGTGGCT GAGTACCTCA GCAGCGGTAA GGAAATCGGT CCCGATACGA 
CGATGGGAGA TATCAACCTT GTGTTGTTGT CTAACCATCA GAATGTTGGA GCAAATGCTC 
CGAACCCGGC TGCTGGACTC GACCCTCGCC ACGGAACAAT GAAAGCGAGT ATTAACACAA 
TCTCAAAGTT TTCAGGTGAT CTGGAAGATT TTGAAGACTG GTCAACAAAA CCGCAACGGC 
TCTCGGAATC ACCGTTTATC GTAAACTCCT CAATGGTCCT TGAGGAGTCG GAAATGATTT 
TGATGCCGCC AGAAACAATG AGCTCTATCA CATGTTTGTG ATTGCTCTTG TGGATGGTGC 
CACAATGCAT ATCATGGAAG ACGTGAAGGA CCAGAACGGA TACGCCGCGT GGATGGCTAT 
CAAGGAATGG TATGGTATAT TGGATACCGG TCGGACAATC ATCAACAAGT ATCATAGCAA 
GCTGGATGAG CTACTGCTTG ATGATGCGAC CCCAGCCGGG ACCTTTGTCA ACCATTTCAA 
GAGATTCAGC CAGAAGCTCA AAGAGAATGG TGAGGGTTAT ACGGCGGATA CAAAACGACA 
TCAGTTTCTC GACAAGATCA TTGACAAAGA CTACAATGTG GTCAAACAGC AGTTGGAAGG 
AGATTCAACT GCGGACTTCA ATTAATGTGT TGTGCCCATT TGTATGCGCA AGCAAGTCCT 
CATGAAGGAC TCCACATTGT CGGCCAAGAA AGCTAGACGG TTCAAGTCGA GCGAGGGCGG 
CAAGTCGAAT GGTGGAGGTC CGTCAAGTGG GAAAATTCCT TCGATTCCGA ACTCTATACT 
TAACCTGGTC AAGCCAGCAA GTGCTCGCAA GAATCTAATC AAGTGGAAAG GAGTTTGGAA 
CTCCGAAGGG CGTATTCTTC GATTGGACAA ACTGGCAAGC ACTGAGTATG ACAGGAAAGG 
TAAAACCCCG TTGAAAAGAG AGCACAATAA TGACAGTTCC GACAAATCCG TCAAGACCCG 
CAACACCCAA GGCAAGGGGG GCTCCTTGTC CAAGAAGGGC AAGAGAGGCA AGGGGAGGCG 
AATCACCGGT GTTGTCCGTC GAACGGAAAC GAAGACATCC GGCACGCCTG ACTCCTCCAT 
CCGGATCAGT ATGAAGGATC CGGACGACCA CGTCGAAGGT GATGAGTATA ACGATGTCGA 
AATTGAGTCC GGTCAAGAGG AAGATTCTAC TGCACCTGTG AAGAAAGAAC GGGCGAAAAA 
GCAGAAGAAT CCGTCGAAGC GGAAGCACAA GCGTGCCAAG TCTCGTCAAA GCCCTATCTC 
CCGCCGCGGA CGCGTAGGCA ACAAGAAACC AAGAGCTATC CTAGACCCAG GGACTGAGTG 
CAACATTGTT GGCGGGGACG TATGTGTTAA TAATTCCATT GGGCCTACTA AATCTTTCCC 
ATTCCGCTGT GACAAGACTG ATATTCTCCC AATCCGTTGT GACAAGATTG ATAGTACCAA 
AGAACCTATC ACGGTTACAT ACAGAGCTTT AACGTCCTAC GAACGTTCTA GTCTTCCCGT 
TTACATTTCA AACAAGTCAT CGCCATATGA AACAGTCATT GGCGATTCAG CTGCATCATA 
CAAACTCAAT CACGATTCTC AAACTAGTCA TAAATCTTAT TAG 

 

Protein sequence

MTQTKHGTFD HYLVGLSDAK AALFAEAGIT DWTTIASLDL PAFTQVLGDQ VGTLPKRYKL 
KRVAEYLSSG KEIGPDTTMG DINLVLLSNH QNVGANAPNP AAGLDPRHGT MKASINTISK 
FSGDLEDFED WSTKPQRLSE SPNNELYHMF VIALVDGATM HIMEDVKDQN GYAAWMAIKE 
WYGILDTGRT IINKYHSKLD ELLLDDATPA GTFVNHFKRF SQKLKENGEG YTADTKRHQF 
LDKIIDKDYN VQVLMKDSTL SAKKARRFKS SEGGKSNGGG PSSGKIPSIP NSILNLVKPA 
SARKNLIKWK GVWNSEGRIL RLDKLASTEY DRKGKTPLKR EHNNDSSDKS VKTRNTQGKG 
GSLSKKGKRG KGRRITGVVR RTETKTSGTP DSSIRISMKD PDDHVEGDEY NDVEIESGQE 
EDSTAPVKKE RAKKQKNPSK RKHKRAKSRQ SPISRRGRVG NKKPRAILDP GTECNIVGGD 
VCVNNSIGPT KSFPFRCDKT DILPIRCDKI DSTKEPITVT YRALTSYERS SLPVYISNKS 
SPYETVIGDS AASYKLNHDS QTSHKSY