Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_3687 |
Symbol | |
ID | 7197868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 456630 |
End bp | 457346 |
Gene Length | 717 bp |
Protein Length | 239 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178514 |
Protein GI | 219115437 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0625278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTCGAACAG GTGATCTCGT GGTCATCATG GAGAGCTTTG ATAATCTTGC CTTTGTCTAC GCAAAAGAGG GTGAGATCTT TTCCAATCGA AACGGAAACT TTCACCATAA TGACTTTATC GGTAAGCCCT TTGGCTGCAA GATTCGTTCT CGCAGTCATC GGGGATACGG CTTCGTCTAT CTGCTGAAGC CAACACCGGA ATTGTGGGCA CGTTCCTTGA ATCATCGGAC ACAGATTGTG CATGAACTCG ATCAATCCCA GGTCATTTTT CAGCTACACT TGAAGCCAAA CATGACAGTC GTGGAAAGTG GAACAGGAAG TGGAGCCATG TCGCACGCCA TCTTACGGAC CATTGCACCG CATGGGAAAT TGCACACCTA CGAATTTAAC GAGCATCGAG CAGATACGGC TCGCCACGAA TTCGCCAATA ATGGCGTCGG ACACCTGGTG TCAGTTCACC ACAAAGATGT TTGTGGAATT CGGGGAGACG GGGGCTTTGA TTTGCCACCG CAGTCGGTGG ATGGAGTATT TCTGGATTTG CCTGAGCCTT GGTTGGCTGT GCCGCACGCC GCGTTTGTGA TGAAACCCAA CGCAAGATTG GCTTCGTACA GTCCCTGTGT TGAACAGACC CAGAGAATGG TAGAAACCTT GCGACAATCG GGATTTCATT CAATCAAGAC GATGGAATAC CGGTTGCAAG AACATTACGT GGATGAG
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Protein sequence | IRTGDLVVIM ESFDNLAFVY AKEGEIFSNR NGNFHHNDFI GKPFGCKIRS RSHRGYGFVY LLKPTPELWA RSLNHRTQIV HELDQSQVIF QLHLKPNMTV VESGTGSGAM SHAILRTIAP HGKLHTYEFN EHRADTARHE FANNGVGHLV SVHHKDVCGI RGDGGFDLPP QSVDGVFLDL PEPWLAVPHA AFVMKPNARL ASYSPCVEQT QRMVETLRQS GFHSIKTMEY RLQEHYVDE
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