Gene PHATRDRAFT_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3687 
Symbol 
ID7197868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp456630 
End bp457346 
Gene Length717 bp 
Protein Length239 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178514 
Protein GI219115437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0625278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTCGAACAG GTGATCTCGT GGTCATCATG GAGAGCTTTG ATAATCTTGC CTTTGTCTAC 
GCAAAAGAGG GTGAGATCTT TTCCAATCGA AACGGAAACT TTCACCATAA TGACTTTATC
GGTAAGCCCT TTGGCTGCAA GATTCGTTCT CGCAGTCATC GGGGATACGG CTTCGTCTAT
CTGCTGAAGC CAACACCGGA ATTGTGGGCA CGTTCCTTGA ATCATCGGAC ACAGATTGTG
CATGAACTCG ATCAATCCCA GGTCATTTTT CAGCTACACT TGAAGCCAAA CATGACAGTC
GTGGAAAGTG GAACAGGAAG TGGAGCCATG TCGCACGCCA TCTTACGGAC CATTGCACCG
CATGGGAAAT TGCACACCTA CGAATTTAAC GAGCATCGAG CAGATACGGC TCGCCACGAA
TTCGCCAATA ATGGCGTCGG ACACCTGGTG TCAGTTCACC ACAAAGATGT TTGTGGAATT
CGGGGAGACG GGGGCTTTGA TTTGCCACCG CAGTCGGTGG ATGGAGTATT TCTGGATTTG
CCTGAGCCTT GGTTGGCTGT GCCGCACGCC GCGTTTGTGA TGAAACCCAA CGCAAGATTG
GCTTCGTACA GTCCCTGTGT TGAACAGACC CAGAGAATGG TAGAAACCTT GCGACAATCG
GGATTTCATT CAATCAAGAC GATGGAATAC CGGTTGCAAG AACATTACGT GGATGAG
 
Protein sequence
IRTGDLVVIM ESFDNLAFVY AKEGEIFSNR NGNFHHNDFI GKPFGCKIRS RSHRGYGFVY 
LLKPTPELWA RSLNHRTQIV HELDQSQVIF QLHLKPNMTV VESGTGSGAM SHAILRTIAP
HGKLHTYEFN EHRADTARHE FANNGVGHLV SVHHKDVCGI RGDGGFDLPP QSVDGVFLDL
PEPWLAVPHA AFVMKPNARL ASYSPCVEQT QRMVETLRQS GFHSIKTMEY RLQEHYVDE