| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36534 |
|---|
| Symbol | |
|---|
| ID | 7201842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 685024 |
|---|
| End bp | 686336 |
|---|
| Gene Length | 1313 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181053 |
|---|
| Protein GI | 219120637 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.472214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG GTGAGGTCGG TGACAATGTG GCGTTTGGCT TTTGCGTGAG CCTCACTGTC
AATGACATCG TTGCCGACTC ATTAATGTAA TGCATCTATC TTTCAGTGTC ATCGTACCTG
TGTTGTACCT ATTTTCACAA GGTCGTTTGG TACACTCACT TTCTGTCCGA AAGTGTCCTC
GAAATCTTCC TTCGATTGAA TGTTTCCCAT TGCAAACGCT CTCGCCTCCT TTTGAAGACG
ATGCCTATCG AAGTATCTGC AACTTCTACC GGGAAAACTA CTCGCGGAAA CGTATTGTCC
CGTCGCTTCC CAAATTTAAT TGTACGACCA CCGACGACGT GGTCTGTTTT ATGCGCTGTG
AGGGTTCCGA CAGGATTGTC GCCGCCGTGA GGCTCACCCA CGATTCAACG CATCCCGAGT
ATGTCTTCAT ACGATCTTTG TGCATCGAGG TAAGCTTACG GAGACAAGGT CTCGGTTCGC
AGCTGCTGCA GCGAGCGATG GACAACTTCG GGGCATGGTC CTACTACTGT CTCGCAGATC
CCCTGTTGAC ATCATTTTAC GTAGCAGCAG GCTTTACAAA GGCTGACTCC TCGAACGACG
TACCTACATC CATCAGTCAG CGCTACGAAT CTATCGCTCG TCGGGTCCAG CGCAAGAATC
GAGAGCTGCA TTTTTTTGTT CGAAGACCAC AACCGCCTCC TTGTGCCGTT ATTCTACTGC
AACATGTCAA CGAAAATAAT CGAGCCACCG CTACGGGCTG GCTCGTTGAT GACGAAGCCT
ATCAAAAAGC GACTGGTACA AATCTGACCA CTTTACAATC CCAACTTACC GTGGCGCGCT
GGACATGGTC TGGGCGTGCC GACAACGAAC ACATACAAAA GATGCTGTCC GATCTACCAT
CAACACCGAT CTTGTTGTGG GCTAAGAAAG CTGACAAGTC GTATAGAATG GTAGCAAGTG
GTGAACATTT TACACCAATC TATATTATAC TGGATGGCAC CTGGCAGGAA GCCCAGTCCA
TGTTTCGGAA AATCCCGTCG CTTTGGCAAT TGCCACGTTT GTCGCTTTCC TCCAGCACGC
GGTCCTCCTA CGTGTTGCGA CACGACTATA CGGGATGGAA ACAACGGTTT AGCAGTCAAG
GTGGAGAGGA TCTACTCTGT ACTGCCGAAG TGATTGCGGC ACTTTTAGAT GAGAGCCTAA
ACCGAGAAAG TGGGAACCTA ATTCGGAATC GTTTGCGTTA TTTTCAAGAC AACTTCCCCC
AAGTAAGTGC TCGTTCTTTC GACGCTGATG CTGACAGCGG CACCGAAGTT TAA
|
|---|
| Protein sequence | MADGEVGDNV AFGFCVSLTV NDIVADSLIV IVPVLYLFSQ GRLVHSLSVR KCPRNLPSIE
CFPLQTLSPP FEDDAYRSIC NFYRENYSRK RIVPSLPKFN CTTTDDVVCF MRCEGSDRIV
AAVRLTHDST HPEYVFIRSL CIEVSLRRQG LGSQLLQRAM DNFGAWSYYC LADPLLTSFY
VAAGFTKADS SNDVPTSISQ RYESIARRVQ RKNRELHFFV RRPQPPPCAV ILLQHVNENN
RATATGWLVD DEAYQKATGT NLTTLQSQLT VARWTWSGRA DNEHIQKMLS DLPSTPILLW
AKKADKSYRM VASGEHFTPI YIILDGTWQE AQSMFRKIPS LWQLPRLSLS SSTRSSYVLR
HDYTGWKQRF SSQGGEDLLC TAEVIAALLD ESLNRESGNL IRNRLRYFQD NFPQVSARSF
DADADSGTEV
|
|---|
| |