Gene PHATRDRAFT_36449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36449 
Symbol 
ID7201820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp473761 
End bp474300 
Gene Length540 bp 
Protein Length179 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181015 
Protein GI219120558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGGAA GCCCAAGGAT TGTTACCTCT AACGCCATCA ACGTTATCTT TCTAGATATT 
GACGGAGTTT TATTACCCTT TTTGTCAAGC GGCTTAAAAG ATCTTTTTCC GGATCGAACC
TTAAAGGCTT TGACGTCAAT TATTGAACAG TCGTCGTCGC CCAATTGTAA AACGGAAATT
GTCTTGTCCT CAACTTGGCG TGTTCAAGAG CGGTTTCGGC AAGATATTCT TCGCGATTTT
CATCGATACG GTGTAAATCA AGGTGGACCT CTGAAATCAA TTGAATTCTA CGATTTTACG
GATCCCTGTA TGCATTCTGA ACGACAGCAT GAAATATTTT CATGGCTCTG TGAAAATGAC
CAAAAAGTTG CTGCATGGGT CGCTCTTGAT GACGAAGAAC TGCTCGAAGG CGATGCCAAT
CGAGCCTTCC GAAACACATT TGACGGACAT GTTGTCAAGA CGAACAGTCA TCGCGGATTG
ACTATGCAGG ATGCCAGCGA AGCGGTACAA CTGCTACAGG AGCAAAAAAT GAAACCCTGA
 
Protein sequence
MVGSPRIVTS NAINVIFLDI DGVLLPFLSS GLKDLFPDRT LKALTSIIEQ SSSPNCKTEI 
VLSSTWRVQE RFRQDILRDF HRYGVNQGGP LKSIEFYDFT DPCMHSERQH EIFSWLCEND
QKVAAWVALD DEELLEGDAN RAFRNTFDGH VVKTNSHRGL TMQDASEAVQ LLQEQKMKP