| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36284 |
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| Symbol | |
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| ID | 7201897 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 65431 |
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| End bp | 68358 |
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| Gene Length | 2928 bp |
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| Protein Length | 924 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180746 |
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| Protein GI | 219119995 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0182118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGAG GACAACGACA ACTCCCCCCC CAAAAGGCCT GGTTTATCAT TCCTTCCTTG
TCTCGTACGT AGTAAGAAGA ACAACTGTAC TCAACAACCA GAGATACAAT TCTTCGTAGA
ATGGAGGATC CTTCGCTTCG CACGACTGTC CGTGTCGGGA ACGACTATCG CGTGAACGAC
GACGTCGACC TGGACGAAAA AGACGGAGGG GACGCTCACC TCCGCGACGA TGACGACGAC
TCCACAAACA GCCCTCGTCG TCGCGGTGTA CCGCCGTTAC TCCCCGCGGG TCGTCGTCGG
ATGATTCTGA CCGACGAAGC GGACGAAGAG ACGTCGTCTA CCACTGTATC GAGCCTCACA
ACCAAAGTCG GGTCATCCTC GACACGACAC CAGCCCCCCC GACCTTCCGT CCGTTCCGTC
CGACACAGCG TACTCCCCAC CCACGCGCCG GGACGTCGCC GACGTCGCTC GTCGGCACGC
TTTTTGCGTC TCAGTGGTCA GCATCATTCC CGTCACAGTC GCAACGATGG CACAATGACA
ACGACGACAT CTTCGTCCGC GGCACAACTC GGCGAACTCT ACAAACAAGC CATTCGAATG
AACGCCGAGA ATAGGATCAA CGCCAGCAAT AGTTGGAATC TAGCACTCAT TGAGAATATT
GATCAATTCC TGCTCCTTGA AGAAGAAGAA GAAGAAGAAC AGCACGAGGA CCTCCCTCGC
GATCACCGCC GTCCCGAAAA CGACAAGAAT CGACTCACTC TCAACAACGC GCAACCCACG
CCAACGCCAC GCCGTCAGCG CGTTAACTTT ACCAAGGCAT CTTGTACACT TGACGCATCG
GTCAAGATTT ATTCCTACCG GGTCGACGAC GTACACCTTT CCAGTTACAA GGTGCTCGCC
AATCTCAACC GCAACGACCA AAACGCCAAC CACAAGAACG CCGATAGTGA CAAAGACAAA
AACACCCATC CGGATCCCGA TCACCACAAT GCTGGCAATC ACAAAAAATC CACTCACTCG
TCCCACGCAT CCACCTTGGA AACCAATATG GGTGCGTAGC CAACCTTCCT GTAGATGTAC
GCCCTTTGTC CCCCTCTCAC ACCTTGCTAC TTTCCCATTC ATTCGTTCCA TCCACATATC
CATTCTTCTT GCGCCTACGG AACAGCCAAC ATTAACCTCA ACAAGCTCGA TGCCGCATTC
GATATTGATC CACTCTTTCA CAAAATGTCC AAGACTTTTG ATGAAGGGGG TGCCAAGGGA
CTGCTCCTCG CAAATCTGGG CGTCAGCAGT CACGGTTGCA ACGTCGTCTT TGACAGTACC
AGTAATGACT CCAATCCAGT CGCCGAAGAA AAAACAGAAG ATGACCGTCA CGTTAACGAG
ACAACTTACG CTCCCGTTGA CATTTCCTCA CTTCGCGCCA AACTCGAAGC TCTCGTCAAC
ACAAACGACC CCGACGGCAA CACCGGTGGT ACCTTTTTGG AAGATTTGGC GCTCGTCCCG
CAGCTTACAT CCCTCCGTGC CGAACACGAT CGTCTCGCCG CGGAAGGATT CGTTCTCGAC
GACAACCCGA CGATGACGAG CACCAAAAAT CGTGGTTCGC AACGCTACGC CCCCACAGCG
GACGAAGAAA CGCAGGCCGA CCAAAGCATT CACCAAGAAG CCTTGGAACG AAGTCGCCGG
ACCAACAAGT CGTTTCTATC CGAAACGGAC CAAGAATATG AAGAAATCAT CGGTTCGAGT
ACATCACAGC AGCCTCCGCA ATCATTATCG ATTGGATACG ACGACGCCGA CGACTTTGGT
GGTGGTTTTG ACGATGGGGA CGACGATGAT GCGGGTTTTG ACGATTTTCT CCAACGCGAC
CAGCAGGGGG CTCGGTATTC CTCCATATCC TTCTCCGGAT CGGTGCAAAA CTTTCAAGCC
CAGGAAGGCG CATCCGACAC CGACGTACCG ACATCCACCG CATTGTTGGA GGCGTTGCTG
GGGTCGCAAG CGTTGACGGA CCAGGATCAG TACCGTTATT TCGACGCCGA GTTGTTGTCG
TCCGCCGTTC ACGCGAATAA TGCTTGGGCC GGAGCCACGC ACTGGAAACG CACGCCCAAA
GTTGCAACCA CCACGGGACC TTCCGTCGCC AAGACCAAGT CTCAACGCAA GAAACCCCGT
GCTTTGGTTG ATTTGACTGC CACGGCCTGT CTGGACGATG TACTTCGTTC ACCACCGAAG
ACGTCGAGTT TGTCCTGGAG TCAAGCCATT GTGCAAAAGT ACACGAATGC GGAGCATTCC
AACCTGTTGC CTCCCGACGC CGAAATGGAC GTGGAGACTT TGTCGACCCT CTTTTTGCGG
CCTCAGAGTG TCTGTCGTGG TCTATCGGTC GCCGGGGGAG GGGACAAGGT ATCTACGCCC
AAGGCGGTCG GCTTTAATAT GGGTGGCGTC GAAACCTTTG GTTGGGATGA TGGTCACGAT
GACGACGGTG AAGGTGGCGG CTACGACTTT GGTGGTGACG ACGATGACGA TATGAGTTTC
GTTGCACCGC TCGAAGACAT CCGCAAGGTG GACAAGGTTC ACGTGGGCTA CGCCACGGTC
GCCAAAAAGG TGGACGTCAA GCGACTCAAG AAAGACTTGT GGATCGAGCT GGAAGCAAAA
CTGGCCGAGC CAGCCAAGCT CGGCGAACAC AAGGATCATG ACGCGGACGA CAGCTCCATG
TCATTGAGCG ATGCTGTGAC CCCTTCTAAA CCATCACTGC CACTATCCTT TCAAAAGGCC
GTGCAAGACC TGGAAGCCAC CAAAACGCAA GCAGACGTGA CCTTGCCGTT TTACTTTATT
TGTATTTTGC ACTTGGCCAA CGAAAAGGGA CTGCGACTGG ATAGTCACGG TTTGGAAGAT
TTCGGTATTG TCTATGATGC AGCCGGGGTA CCGTTGGCGG GGGTGTAG
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| Protein sequence | MGRGQRQLPP QKAWFIIPSL SHTILRRMED PSLRTTVRVG NDYRVNDDVD LDEKDGGDAH
LRDDDDDSTN SPRRRGVPPL LPAGRRRMIL TDEADEETSS TTVSSLTTKV GSSSTRHQPP
RPSVRSVRHS VLPTHAPGRR RRRSSARFLR LSGQHHSRHS RNDGTMTTTT SSSAAQLGEL
YKQAIRMNAE NRINASNSWN LALIENIDQF LLLEEEEEEE QHEDLPRDHR RPENDKNRLT
LNNAQPTPTP RRQRVNFTKA SCTLDASVKI YSYRVDDVHL SSYKVLANLN RNDQNANHKN
ADSDKDKNTH PDPDHHNAGN HKKSTHSSHA STLETNMANI NLNKLDAAFD IDPLFHKMSK
TFDEGGAKGL LLANLGVSSH GCNVVFDSTS NDSNPVAEEK TEDDRHVNET TYAPVDISSL
RAKLEALVNT NDPDGNTGGT FLEDLALVPQ LTSLRAEHDR LAAEGFVLDD NPTMTSTKNR
GSQRYAPTAD EETQADQSIH QEALERSRRT NKSFLSETDQ EYEEIIGSST SQQPPQSLSI
GYDDADDFGG GFDDGDDDDA GFDDFLQRDQ QGARYSSISF SGSVQNFQAQ EGASDTDVPT
STALLEALLG SQALTDQDQY RYFDAELLSS AVHANNAWAG ATHWKRTPKV ATTTGPSVAK
TKSQRKKPRA LVDLTATACL DDVLRSPPKT SSLSWSQAIV QKYTNAEHSN LLPPDAEMDV
ETLSTLFLRP QSVCRGLSVA GGGDKVSTPK AVGFNMGGVE TFGWDDGHDD DGEGGGYDFG
GDDDDDMSFV APLEDIRKVD KVHVGYATVA KKVDVKRLKK DLWIELEAKL AEPAKLGEHK
DHDADDSSMS LSDAVTPSKP SLPLSFQKAV QDLEATKTQA DVTLPFYFIC ILHLANEKGL
RLDSHGLEDF GIVYDAAGVP LAGV
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