| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36256 |
|---|
| Symbol | |
|---|
| ID | 7201507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 933273 |
|---|
| End bp | 934546 |
|---|
| Gene Length | 1274 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180733 |
|---|
| Protein GI | 219119966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGCT TTATAGTTGT GAACGCGGGC TCATCCTCGT TGAAGCTTGC AATTTTGGAA
GAAGAAAAGC AACTTGCCGG GTTTTCTGCG GAGCATCTCA ACTCGAAAGA ATCCAAAATC
ACTGCTTTCG TTTCCCCGTC ATACAAAGAC ACAAAGTACA TAGCAAACTT GAACTATGAG
GAATCTTTAA GGCAAATTTT TGAAATCATC AAAGCAGAAA AAAAGGAAGT GTTAAGGAGA
ATTACGGCCG TGGGTCATAG AATAGTTCAC GGGGGAGAAC ACTTTACTCA AGCTGTGGTG
GTCGATAAAG CAGTCATGGA AAAGATTGAT GCCCTCTCCC ATCTAGCCCC GCTGTACGTA
TACGTAGATT TTGGAGGTGT ACATTTTGCA AATATGCGTG TCTTACCTTC ACAACGTACA
GTCACAATCC AAACAGCCTC ACGGCTATAA AGCAGTGCAG ACGAGAGCTC CCGAACATCC
CAAACATAGC CGTTTTTGAC ACTTCGTTTC ATCATTCATT GCCGGCGAAG TCTTCAACGT
ATCCTCTTCC CAAGGCGTAT CGCGACGCAG GGATTCGGAA ATATGGCTTT CATGGTACGT
CCGTGGAATT CGTCGCTGAC AAAGCCGCGA AAATTCTCCG CACGCGAAAG GAGAGTCAAT
CCTACAACAT TATTGTATGC CATCTCGGAA GTGGTGCGTC GGTGACGGCC GTAAGTGGCC
AAAAGTCCGT AGAAACTTCT ATGGGGTTTT CGCCGCTGGC TGGGTTGATG ATGAGTACGC
GATCTGGAAG CGTAGACCCT GCGATTGTGT CTTACGCTGT GGAGAACTTG GGAAAGTCCG
CAGACGAAGT CTTGCTTGAC CTAAACAAAA ATAGCGGTCT TAAAGGAATG ATGCAAGGGG
CCGAAAGGTC TATGGTACGC CTCCTCGAGA AGAAACGTGA AGGAGATCAA GACGCTATGT
TGGCCGTTGA AATGTTTGTC TATCGACTAG CTCAGTATAT AGCAGCTAGC GCGGTAGCTT
TTCAAGGTTG TCTCGATGCC CTCGTCTTCA CTGCAGGAAT AGGAAGAAAT TCGGCCCACA
TCAGACGTCG ATGTCTTGAA CAACTCAAAC CACTAATTTC GATTGAAATC ACGAACGACC
TCAATGCTGA AAACGGAAAG ACTACAAATG GTGTGCTGAG TCCCTTGGAC GTATGGCCGG
TTTGCCTCGT CGTCGAAAGC AACGAAGAAC TGGCGATTGC AAAAAAGTGT GACCACGTGT
TATCAGATTT ATAG
|
|---|
| Protein sequence | MQCFIVVNAG SSSLKLAILE EEKQLAGFSA EHLNSKESKI TAFVSPSYKD TKYIANLNYE
ESLRQIFEII KAEKKEVLRR ITAVGHRIVH GGEHFTQAVV VDKAVMEKID ALSHLAPLHN
PNSLTAIKQC RRELPNIPNI AVFDTSFHHS LPAKSSTYPL PKAYRDAGIR KYGFHGTSVE
FVADKAAKIL RTRKESQSYN IIVCHLGSGA SVTAVSGQKS VETSMGFSPL AGLMMSTRSG
SVDPAIVSYA VENLGKSADE VLLDLNKNSG LKGMMQGAER SMVRLLEKKR EGDQDAMLAV
EMFVYRLAQY IAASAVAFQG CLDALVFTAG IGRNSAHIRR RCLEQLKPLI SIEITNDLNA
ENGKTTNGVL SPLDVWPVCL VVESNEELAI AKKCDHVLSD L
|
|---|
| |