Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_3621 |
Symbol | |
ID | 7197493 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 1020720 |
End bp | 1021610 |
Gene Length | 891 bp |
Protein Length | 259 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177739 |
Protein GI | 219111975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0123759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ACTCCATCAA TAGCTTCCCT TCATGGTTCG TTGACAGGTA TGCTACAGTG GCTCTTGGAC TTCCCGCCAT CAAATCGCTC ACAAGCAAGA TTTGGAAACC CTATGTTTCG GATGTGGCAC AAAAGACTTG TCGAGCGTAG TGTCAATGTG GTTTATACTA TTCTTAGAGT GCAAAAGGAA TACCCAGGTA GGGGAAACTT TAACAAAGAG GTGTTACAAT CTGCTTCGAA ACGCGGTCTC GCCGCTATTG ATCAAGTAAA GGAGATTGAA AGCATTACCG AACAGAATGA TCGGGACATC GTGATTGAGT TGATTGCCTA TTTCCAAGCC GCCTTTGGTC ACGAGGTTCG TCTAGATTAT GGCACTGGTC ACGAATGCTC CTTTCAAGTC TTTTTGTTTG TGCTTTGCAA ATTAGGATGT TTCGGTTCGA CCACTGATGT GCCACCTTCC GCTGAACACC TCAAAGCGAC AACAATATCG ATATGGAGTG CTTACCTTTC GTTGACTAGA CAAGTACAAA CCGATTATAT GCTCGAACCC GCAGGATCTC ATGGTGTTTG GGGTCTAGAC GACTATCACT GTCTTCCCTT CTACTTTGGC GCGTGTCAGA TGCAAAGCGA TGGTCTCGAC TATAGGCCTG ACAGTATCCA TGACAATTCT TTGTTGGAGA GAGAACGCAA CTCGCTTTTG TATTTTGGTT GCATTCGTTA CATCAAATCT CTCAAAAAGG GCGCACCTTT TTACGAGCAT TCACCGATGC TAAACGATAT CAGCAACCTG CTGAGTTGGG CGAAGGTGGC ATCGGGTCTT TTACGGCTGT TCGAAGGCGA GGTTCTGGAC AAAAGGCAAG TTGTTCAGCA CTTTGTCTTC AAGAACCTAT TCACAGCGGA C
|
Protein sequence | TPSIASLHGS LTGMLQWLLD FPPSNRSQAR FGNPMFRMWH KRLVERSVNV IESITEQNDR DIVIELIAYF QAAFGHEVRL DYGTGHECSF QVFLFVLCKL GCFGSTTDVP PSAEHLKATT ISIWSAYLSL TRQVQTDYML EPAGSHGVWG LDDYHCLPFY FGACQMQSDG LDYRPDSIHD NSLLERERNS LLYFGCIRYI KSLKKGAPFY EHSPMLNDIS NLLSWAKVAS GLLRLFEGEV LDKRQVVQHF VFKNLFTAD
|
| |