Gene PHATRDRAFT_36107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36107 
Symbol 
ID7201270 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp552655 
End bp553206 
Gene Length552 bp 
Protein Length109 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180460 
Protein GI219119397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.392899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTGG CTCCTCGCAA GCCGCCGAAG AGATTTCGGA ATACAAAGAA CCCCACAAGC 
CGTTCTTCTC AGGCAAAGCT GCGGTTGAGC AAGTTCTCGG TCTTGCAATG TGGCATTCTT
ATTGCTCGCG CCCGCTGGCA TTTACGCGTC GCCGTAAATT GGCAAAGCTG AAGCAATTGC
TCATTGCACG TTTGCTTAGG CCCACTCGGA CACATATTGC ACGTTTGCTT AGGCCCATTC
GGACACATCT ATATGCCGTC GTCCAATGCC GGTCCCTTGG AAGTGGCCAT CAGTGAAGAC
AAGATACACG CTCTTTTGGC AGAGCAACTA CAGTAAAAAA TGTCTCGGCA ATTTTAAGAC
GCCAATTGTG TGCAGGAACA GCTCTTGTCC AACGGAGTTT ACGTCCTTGA CGCTCGTAAA
GAATGGTGCG CTGACGGTGT CATGTTTGGT GACTATGCAA ACGAAGGGGG TTACCCGAGC
CGTGAACAAG GCTTGCGCAG CAACCCCAGT TGCCTTTACG CTGAATCGGA ATACTCAGAT
GGCGAATTTT AA
 
Protein sequence
MGLAPRKPPK RFRNTKNPTS RSSQAKLRLS KFSVLQCGIL IARARWHLRV AEQLLSNGVY 
VLDARKEWCA DGVMFGDYAN EGGYPSREQG LRSNPSCLYA ESEYSDGEF