Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_36107 |
Symbol | |
ID | 7201270 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 552655 |
End bp | 553206 |
Gene Length | 552 bp |
Protein Length | 109 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180460 |
Protein GI | 219119397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.392899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTTGG CTCCTCGCAA GCCGCCGAAG AGATTTCGGA ATACAAAGAA CCCCACAAGC CGTTCTTCTC AGGCAAAGCT GCGGTTGAGC AAGTTCTCGG TCTTGCAATG TGGCATTCTT ATTGCTCGCG CCCGCTGGCA TTTACGCGTC GCCGTAAATT GGCAAAGCTG AAGCAATTGC TCATTGCACG TTTGCTTAGG CCCACTCGGA CACATATTGC ACGTTTGCTT AGGCCCATTC GGACACATCT ATATGCCGTC GTCCAATGCC GGTCCCTTGG AAGTGGCCAT CAGTGAAGAC AAGATACACG CTCTTTTGGC AGAGCAACTA CAGTAAAAAA TGTCTCGGCA ATTTTAAGAC GCCAATTGTG TGCAGGAACA GCTCTTGTCC AACGGAGTTT ACGTCCTTGA CGCTCGTAAA GAATGGTGCG CTGACGGTGT CATGTTTGGT GACTATGCAA ACGAAGGGGG TTACCCGAGC CGTGAACAAG GCTTGCGCAG CAACCCCAGT TGCCTTTACG CTGAATCGGA ATACTCAGAT GGCGAATTTT AA
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Protein sequence | MGLAPRKPPK RFRNTKNPTS RSSQAKLRLS KFSVLQCGIL IARARWHLRV AEQLLSNGVY VLDARKEWCA DGVMFGDYAN EGGYPSREQG LRSNPSCLYA ESEYSDGEF
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